Abyssicoccus albus: BVH56_05890
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Entry
BVH56_05890 CDS
T04690
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbac
Abyssicoccus albus
Pathway
sbac03030
DNA replication
sbac03430
Mismatch repair
sbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVH56_05890
03430 Mismatch repair
BVH56_05890
03440 Homologous recombination
BVH56_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbac03032
]
BVH56_05890
03400 DNA repair and recombination proteins [BR:
sbac03400
]
BVH56_05890
Enzymes [BR:
sbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVH56_05890
DNA replication proteins [BR:
sbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVH56_05890
DNA repair and recombination proteins [BR:
sbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVH56_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
T4_deiodinase
Motif
Other DBs
NCBI-ProteinID:
AQL56481
LinkDB
All DBs
Position
complement(1139220..1142186)
Genome browser
AA seq
988 aa
AA seq
DB search
MFILDVRSHFELLKSTLSIDEIVEYAKENGYTSVAIADEYSFHYALKLRNRCIDHDIKPI
YGITIWISDGIDDFECQLYAKSNKGFRYLMYLTSRVNTEQLQVVPIEWLQKIADEIVIVA
RLATESCSEMLQQIDSDYIYIDQLSKTDAFEKIYVETCRYLDDADQNALKALAAMDEHMS
YHDVVVKYPHTSLHHMHEIIQAHDVDHGQLINMTEKIEQLCTVDLSFDEKHLPSFKFHPY
ETSDEALNVLLKHYINKMPFWNEDYEQRLQHELEVIREMGFSDYFLIVHDIIAHCRKNHI
YVGPGRGSSAGSLVCYTLGITQVDPLEHQLLFERFLNKERVTMPDIDIDFEDRYRQKVVN
YIVERYGEQHVANIVTYTHLTLKGISREIARILKLSKQDVDMIVQWINKDEVNKVSDLLQ
KESFVQWMNEHELIHEWFTIAQSLEGIPKNTGTHAAGVVVTGEKIIKFTPLLIQNDALTT
GWDMNEVEQAGLLKIDILGLKNLTMLHRIVDKVNQYDHSFKLNQMNMEDSKVYELIADAK
TMGVFQLESDGMRAALKQVKPKQFSDVVAVIALFRPGPMEQITTFSERLHHASKVEYLHN
DLKPILEETQGIIVYQEQIMQIANKIAAFNYAEADLLRRAMSKKNKTLLQSYQKTFVRQA
VANGYDESLAIEIYHLIEKFANYGFNKSHSVAYSKIIYQLAYLKVHHPHAFYTEALNLAT
NDTNKTMILLQEAKSLGLKIYGPSVSYSTYYYSTAKDGIRMPLKVIKHVGPNVAKDIIKE
CQQGGIYRDLFDFTSRLKASKISRSVYESLIYAGAMDEFGVDRATLLRSLDHAMSIGSEV
NENSYFNQVFTPKKDYIKGSNMDEATKLNKEIEVLGIYVSSHPVELYDDFRRERGIPLIT
EVEINTVSEFIVYVEQCKVITTKHNREMAFLELYDGVTTIDGVVFPDQYFNIKQHLDEQI
MIIYGKKQERNGREQIVVQDIKSLPTSQ
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgttcatattagatgttagaagccactttgaattattgaaatcaacattatcgattgat
gaaattgtagaatatgcgaaagagaacggatatacaagtgttgccattgcggatgaatac
tcatttcattacgcgttgaaactgagaaatcgttgtatagatcatgatataaaaccaatt
tacggcatcacgatttggatttcagatggcatcgatgattttgaatgtcaactctatgct
aagtctaataaaggttttcgttatttgatgtacttaacaagtcgtgtgaatactgaacaa
ttacaagttgtcccaattgaatggcttcaaaaaattgcagatgaaattgttattgtcgct
cgtcttgcgacagaatcttgtagtgaaatgttacaacaaatcgatagtgattatatttat
atagatcaactttcaaaaacagatgcatttgagaaaatctatgtggaaacttgtaggtat
ttagatgatgctgatcaaaatgcactaaaagcattagcagcaatggatgaacatatgagc
tatcacgatgtagtcgtaaagtatccacatacttctttgcatcatatgcatgaaataatt
caagctcatgatgtggatcatggacaattgatcaatatgacagagaaaattgaacagtta
tgtacagtagatttatcgttcgatgagaaacacttgcctagcttcaaattccacccttat
gagacaagtgatgaagcattaaatgttttactaaaacattatattaataaaatgccattt
tggaatgaagactatgaacaacggttacagcatgagctagaagtcattcgtgagatgggc
tttagtgattacttcttaattgttcatgatattatcgcacattgtaggaagaatcatatt
tatgttggacctggtcgtggttccagtgcaggttcattagtatgttacacccttggaatt
actcaagttgatccactggaacatcagttgttattcgagcgttttttaaacaaagaacgt
gtcacaatgcctgatattgatatcgactttgaagatcgttatcgacaaaaagtggtaaat
tatatcgttgagcgatatggagaacaacacgttgcgaacattgtcacgtatacccattta
acgttaaaagggatatcgagagaaatcgctagaattctaaagctatctaaacaagatgtg
gatatgattgtacaatggatcaataaggacgaagtgaataaagtcagtgatttgttacag
aaggaatcatttgttcagtggatgaatgagcatgaattgatacatgaatggtttacgatc
gcacaatcactagaagggattcccaaaaatactgggactcatgcggccggtgtcgttgtc
acaggtgaaaaaattattaaattcacaccactactaatacaaaatgatgcgttaacaacc
ggatgggatatgaatgaagtagagcaagcaggactgctaaaaattgatatactggggcta
aaaaatttgacgatgctccatcgtatagttgataaagtgaatcaatatgatcattcattt
aaattaaatcaaatgaatatggaagattcaaaagtgtatgaactcattgcggatgcaaaa
acgatgggggtattccaacttgaatcagacgggatgagagcggcattaaaacaggttaag
ccaaagcaatttagtgatgtcgtagctgtcattgcattgtttaggccaggaccgatggaa
caaattactacgttctcggagcgattacatcatgcttcaaaagttgaatatctgcataat
gatctaaagccaatcctggaggagactcaaggcattattgtttatcaagaacaaattatg
caaattgctaataaaatcgcagcattcaattatgctgaagcggacttattaagacgagca
atgagtaagaagaataaaaccttacttcaaagttatcaaaagacgttcgttcgacaggct
gtagccaatggttatgatgaatcattggcaatcgaaatatatcatttgattgaaaagttc
gcaaactatggctttaacaaaagtcattctgtcgcatatagtaaaataatttatcaactt
gcttatttgaaagttcatcatccacatgccttttatacagaagcgttaaatttagccaca
aacgacacaaataaaacgatgattttgctacaagaagcaaaatcattaggattaaaaatt
tatggaccatctgtgagttattccacatattattattcaactgcaaaagatggtattcgt
atgccacttaaagtcattaagcatgtcggacctaatgtagcgaaggatatcattaaagaa
tgtcaacaaggcggtatatatcgtgatttatttgattttacaagtcgattgaaagcatcc
aaaatatcaagaagtgtatatgaatcattaatttatgcaggtgcaatggatgaatttggt
gtcgatcgagcaactttattaaggtcattagatcatgcgatgagtattggctctgaagtc
aatgaaaactcctattttaatcaagtatttacacccaaaaaagattatattaaaggctcg
aatatggatgaggcaacaaaattgaataaggaaattgaagtattaggcatttatgtatcg
agtcatcctgtagaactctatgacgatttcaggagagaaagaggcattccgttgattacc
gaggtagaaataaacacagtaagtgaattcattgtttatgtcgagcagtgcaaagtcatc
acaacgaagcacaaccgtgaaatggcctttcttgagttatatgacggtgtaacgacgatt
gatggtgtggtttttccagatcaatatttcaacataaaacaacatttggatgaacaaatt
atgatcatttatggtaaaaagcaagagcgcaatggacgtgaacaaatagtcgttcaagat
attaagtcattacctacatcacagtaa
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