Abyssicoccus albus: BVH56_06550
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Entry
BVH56_06550 CDS
T04690
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sbac
Abyssicoccus albus
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbac03400
]
BVH56_06550
Enzymes [BR:
sbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVH56_06550
DNA repair and recombination proteins [BR:
sbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BVH56_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
DEAD
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AQL56598
LinkDB
All DBs
Position
complement(1277567..1281160)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSNTPQWTEDQLRAIEAKDSDILIAAAAGSGKTTVLVERIMQKILNDSISIDELMIVTFT
NASAKDMSLKIEKAIHKYLKADPKNEHLLSQLSKLQDAHISTIHSFCLKLIQTYYYLIDL
DPNFQTADSNEVKLLLNDSIDTVLNDISGNPLEVDELTKFLSMLNIYANEETLYKIIING
YYHYIAKPDYDEVIEQEIEILQHQPEAYIKQQLEIVNNDLNGQFSILFRLFNQFSQLLMD
KQLDVCQNTVNVEESPFKLTDTFISKYERNVSMIQRMFMLYQQNELDYKTVNQYFIDITL
KNFTITISKKMTESEEGLALKEAYWLYKEQLKQIVEQFVAIDYDEHIEYSYGAIDAQIFY
LKLIQKVIAQYGALKRRNQYIDFNDYEHFALDIIRARHGFVADHYRQQFKEIMVDEYQDT
NLMQEAIINELKRYEPYSNVFMVGDVKQSIYRFRQAEPQLFIDKFNKYKEDIDGKLITLS
KNFRSNKMVLDFTNMFFEAVMDSSVGEINYDDDQKLYFGKGQSSIEDQPVVLNIITENEQ
EQVEYDEIVELEAHFIAQNIIDKIKASNGELSYRDFAIIHRKNKDINTYKRIMSEYNLPF
YAENVSGYYDAIEVKLVMSILKVIHNPMYDIPLIGILRSYCYYFNEEELAMIRIDSDQSN
SRLSFYEQLQYISTSNTHPLQSRCKQVLDDIENLRAYSLKHSMNELLVYIYDYYHLIEKQ
VGLPNSEQRQANLQGLFERTKQFNEGHNVVIMDFIRYVQRLLDDNIDIGEVSVLRDDADV
VKLMTVHKSKGLEFEYVYYCLNYEMMSRVMDNRVILTDETGVTMPAFNQEYLYTFESIQS
NAAKLIRKHLSYSEELRLIYVAMTRAKQQLIFVTNESLDEDDLDLESHYQYSVLDQRIAS
FERLQYKKASDFVYAVFAELYYQANKINRNHDIRYNIEFPKVKAVQPLLKQNQDRDDDMI
QEDAWFERIDTPYSSNRLNKPTKISVSDIKATEGDQTVKTYEINQSTQHDQVILKRPKFL
AETKQLTRAEYGTLMHKVMQHLPFKDTVDANMVESLVRSLVDDGTITDDEFNIVNMNEIQ
KFYNSKLYDRILNANEVIEELPFIVNRSHINESIDYPQLEQGMVDVLLVFDDHYEIIDYK
TDSVQTNRMKDNLESILKERYTTQLVQYKLALQSILKKRVDAYVYHFSGVEVEINGE
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatacaccacaatggactgaagatcaattgagagcaattgaagcgaaagatagt
gatatattaattgcagcggccgccggtagtggtaaaacaacggtattagttgaacgcatt
atgcagaaaatattaaatgatagtatatccatcgatgaattgatgattgttacatttacg
aatgcaagtgcgaaagatatgtccttaaaaatagaaaaggcgatacacaaatatctaaaa
gcggacccgaaaaatgaacatttactgtctcaactgtcgaagctacaagatgcacatata
tcaacgattcatagtttttgcttgaaattaattcaaacctattattatttaattgatttg
gacccgaattttcaaaccgcagattcaaacgaagtaaaattattactgaatgattcgatt
gacacagtgttgaatgatatctcaggtaatccattagaggttgatgaattgacgaaattc
ttatctatgctcaacatatatgcaaatgaagaaacattatataaaatcatcatcaatggt
tattaccattacattgcaaaacctgattatgatgaagtcattgaacaagaaattgagatt
ttacaacatcagccagaggcatatattaaacaacaattagaaatcgtgaacaatgattta
aatgggcaatttagcatattgtttagattgtttaatcaattttcacagttattaatggat
aagcagcttgatgtatgtcagaacactgtaaatgttgaagaaagcccgtttaaattaact
gacacatttatttcaaaatatgaaagaaatgtatcgatgattcaacggatgtttatgctt
tatcaacaaaacgaattggactataaaacggtgaatcaatattttattgatattacttta
aaaaatttcacaattacaatttccaagaaaatgaccgaatcagaagaaggtctggcactt
aaagaagcttactggctttataaagaacaattaaaacaaattgttgaacaatttgttgca
atcgattatgacgaacatattgaatatagttatggtgcgatagatgcacaaatattttat
cttaaattgattcaaaaggtcatcgctcaatatggggcattaaagcgcagaaatcaatat
attgactttaatgattatgaacatttcgcgttggatattattcgtgcacgtcatggcttt
gtagctgatcattatagacaacaatttaaagaaattatggtcgatgaatatcaagatacg
aatttgatgcaagaagcgattataaatgagcttaaaaggtatgaaccttatagtaatgtc
tttatggttggtgatgtgaagcaatcaatatatcgttttagacaagcagaaccacaatta
tttattgataaattcaataaatataaagaagatatcgatggaaagttgatcacattgtcg
aaaaacttccgttcaaataaaatggtattggattttacgaatatgttctttgaagcggtg
atggattcgtcggttggtgaaatcaactatgatgatgaccagaaattatactttggaaag
gggcaatcttcaatcgaagatcagcctgttgtgttaaatataatcactgagaatgaacaa
gaacaagttgagtacgatgagattgtggaactcgaggcacactttatcgctcaaaacatt
attgataaaatcaaagcgtcaaatggtgaattgagttatcgagattttgcaatcatacat
cgtaagaataaagatataaatacgtataaacgtataatgagtgagtataacttaccgttc
tatgctgaaaatgtttcaggatattatgatgcgatcgaagtcaaattagtgatgagtata
ttgaaagtgattcataacccaatgtacgatatcccactgattggaatactcagatcttat
tgctattatttcaatgaagaagaattagcaatgatacgtatagatagtgaccagagcaat
tcacgattatcattttatgagcagttacaatacatttcaacgagtaatacacacccatta
caatcaagatgtaagcaagtgttggatgatattgaaaatttaagagcctacagtctgaaa
catagtatgaatgaattgcttgtctatatttatgattactatcatttgattgaaaaacaa
gttggtcttccaaatagtgagcaaagacaagctaatttacaaggactatttgaacggaca
aagcaattcaatgaaggacataacgttgtgattatggattttatacgttatgttcaacga
ttgcttgatgacaatattgatatcggagaagtgtcagtattacgagatgatgcagatgtt
gtcaaattgatgacagtccataaatctaaagggttagaatttgagtatgtttattattgc
ctgaattacgaaatgatgtcacgggttatggataatagagtgatattgactgatgagaca
ggtgttacaatgcctgcttttaatcaggaatatttatatacattcgaaagtattcaatcg
aacgcagcgaagttaattagaaagcatctatcgtatagtgaggagctcagactgatatat
gttgcgatgacacgtgcaaagcagcaattaatattcgtcacgaatgaatctctagatgag
gatgacttggatttagaatcacattatcaatattcagtgttggatcaacgcattgcatcg
tttgagcgattacaatacaaaaaagcgagtgattttgtatacgctgtttttgcagagcta
tattatcaagcaaataaaattaatcggaatcacgatatacgatataacatcgaatttcct
aaagttaaagctgttcaaccgttattaaagcaaaatcaagatcgtgatgacgatatgatc
caagaggatgcttggtttgagcgtattgatacaccttattcatcgaatcgtttaaataaa
ccgacgaaaatttcagtgagtgatattaaggctactgaaggagatcaaacagtcaaaaca
tatgaaataaatcaatccactcaacatgatcaagttatattaaaaagaccgaagttttta
gcagagacaaaacagttaacacgtgcagagtatgggacgttaatgcataaagtgatgcag
catttaccatttaaagacacggttgatgctaatatggtcgaatctctcgttcgctcatta
gttgatgatggtacaataacagatgatgaatttaacattgttaatatgaatgaaattcaa
aaattttataattctaaactttatgacagaattttgaatgcgaatgaagtgattgaagag
ttaccattcatcgtcaatcgaagtcatattaatgagtcgatagattatccacagcttgaa
caaggaatggttgacgtcctgcttgtgttcgatgaccattatgagattattgactataag
acagattcagttcaaacaaatcgaatgaaagataacttggaatcaatattgaaagaacgt
tacacaactcaactagttcagtataaattggcattacaatctatactaaaaaaacgagtg
gatgcttatgtttatcattttagtggagtagaggttgaaatcaatggagaataa
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