Capillimicrobium parvum: DSM104329_00018
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Entry
DSM104329_00018 CDS
T08390
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00470
D-Amino acid metabolism
sbae00550
Peptidoglycan biosynthesis
sbae01100
Metabolic pathways
sbae01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSM104329_00018 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSM104329_00018 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DSM104329_00018 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbae01011
]
DSM104329_00018 (ddl)
Enzymes [BR:
sbae01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DSM104329_00018 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbae01011
]
Precursor biosynthesis
Amino acid ligase
DSM104329_00018 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UGS33653
UniProt:
A0A9E6XT43
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All DBs
Position
22168..23127
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AA seq
319 aa
AA seq
DB search
MLSGGRSSEHDISLLSGESVRAGLAEAGHDVVDVRLARDGTWSSDGSEVELRAGRGLLRA
DCAFPVLHGPFGEDGTVQGLLECLDVPYVGAGVLPAALCMDKVVFKDVLARAGMPQVDYR
AIREGDDPAVLEPLGLPVFVKPARLGSSVGIAKVSEPGELDGALRDAFTHDPLVIAEAMS
SGLEVECSVLGNRDPIASQPGEILLAAGESGWYDFEAKYSPGGMELVVPARIPEAVRERV
RELAVETFRLTGCTGLARVDFFVEGDEVLVNELNTMPGFTPTSVYAKLFDASGVPYAELV
DRLCRLAVERHERERAYRH
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtcgggcgggcgctcgtccgagcacgacatctcgctgctctccggggagtcggtg
cgcgccggcctggccgaggcgggccacgacgtcgtcgacgtgcgcctggcccgcgacggc
acctggagcagcgacgggtcggaggtggagctgcgcgccggccgcggtctgctgcgcgcc
gactgcgcctttcccgtgctgcacggcccgttcggcgaggacgggaccgtccagggcctg
ctggagtgcctcgacgtcccctacgtgggcgccggcgtcctgcccgccgcgctgtgcatg
gacaaggtcgtcttcaaggacgtcctcgcccgggccgggatgccgcaggtcgactaccgg
gcgatccgcgagggcgacgacccggcggtgctcgagccgctcgggctgccggtcttcgtc
aagcccgcgcgcctcggatcgtcggtcgggatcgccaaggtcagcgagccgggcgagctc
gacggcgccctgcgcgacgcgttcacccacgacccgctcgtcatcgcggaggcgatgtcg
agcggcctggaggtcgagtgctcggtgctcggcaaccgcgacccgatcgcctcgcagccg
ggggagatcctgctggccgcgggcgagtccggctggtacgacttcgaggcgaagtactcg
ccgggcggcatggagctcgtcgtcccggcccggatcccggaggccgtgcgcgagcgggtg
cgcgagctcgccgtcgagacgttccggctgaccggctgcaccggcctcgcgcgggtcgac
ttcttcgtcgagggcgacgaggtgctcgtcaacgagctcaacacgatgcccggattcacc
ccgacgagcgtctacgcgaagctcttcgacgcctcgggcgtcccgtacgccgagctcgtc
gaccgcctgtgccggctcgcggtcgagcgccacgagcgcgagcgcgcataccgccactag
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