Capillimicrobium parvum: DSM104329_00838
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Entry
DSM104329_00838 CDS
T08390
Symbol
pcaB_1
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00362
Benzoate degradation
sbae01100
Metabolic pathways
sbae01120
Microbial metabolism in diverse environments
sbae01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DSM104329_00838 (pcaB_1)
Enzymes [BR:
sbae01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
DSM104329_00838 (pcaB_1)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
UGS34460
UniProt:
A0A9E6XU06
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All DBs
Position
complement(848612..849949)
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AA seq
445 aa
AA seq
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MSSGLFGGVLARGQVAGAVDDHAFLQGMLDFERALARAQAAAGLMEPRAAEAIAAACRAE
DYDPVAIGAQAPSIGNPAGPLVKALTARVEGPGRGQVHRGATSQDVVDTAMMIVARRALT
LLRQDLDGAAFAAAALARAHRATPIAGRTLLQQAVPTTFGLKAASWMTGLDAAADRVLAV
RCERLAVQFGGAAGNLAGLGDRGIEVLEGIARELDLPAPAIPWHTDRTRIADIAGALALA
CGAVAKVARDVVLLSQTEVGEVREGTGGGSSAMPHKRNPVAAISALGAARQAPGLAATLL
ASMEQEHERAAGAWHAEWSPLRELLVAAGSAAAWLRDCLEGLEVDPERMRANLDLTGGLL
LAERVTAALTDAIGRGTAHELVERAASEAGASDRSFAEVLCDDPQVRDHLGADAVGELMD
PTGYLGSAPGLVDRALNAHDHRRPA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagcggcctcttcggcggcgtcctcgcgcgcgggcaggtggccggcgcggtcgac
gaccacgcgttcctgcagggcatgctcgacttcgagcgtgcgctcgcgcgcgcccaggcg
gccgccgggctcatggagccgcgcgccgccgaggcgatcgccgccgcctgccgcgcggag
gactacgaccccgtggcgatcggggcgcaggctccctcgatcggcaacccggcggggccg
ctcgtcaaggcgctgaccgcccgcgtcgagggcccgggccggggccaggtgcaccgcggc
gcgacgagccaggacgtcgtcgacaccgcgatgatgatcgtggcgcggcgcgcgctgacg
ctgctgcgccaggacctcgacggcgccgcgttcgccgccgccgcgctggcccgggcgcac
cgcgcgacgccgatcgcagggcgcacgctcctgcagcaggcggtgccgacgacgttcggc
ctgaaggcggcgagctggatgaccggcctggacgcggcggccgaccgggtcctggccgtg
cggtgcgagcgcctcgccgtccagttcggcggcgccgcgggcaatctcgccgggctcggc
gaccggggcatcgaggtgctcgaggggatcgcccgcgagctcgacctgcccgcgcccgcc
atcccgtggcacaccgaccgcacgcgcatcgccgacatcgccggcgcgctcgcgctggcg
tgcggcgccgtcgccaaggtggcgcgcgacgtcgtcctgctcagccagaccgaggtcggc
gaggtgcgcgagggcacgggcggcggctcgtcggccatgccgcacaagcgcaaccccgtc
gcggcgatctccgcgctcggcgccgcccgccaggctcccgggctcgcggccacgctgctg
gcctcgatggagcaggagcacgagcgcgcggccggcgcatggcacgccgagtggtcgccg
ctgcgcgagctgctcgtcgccgccggctcggccgcagcgtggctgcgcgactgcctggag
ggcctcgaggtcgaccccgagcggatgcgcgcgaacctcgacctcacgggcggcctcctg
ctggccgagcgggtgaccgcggcgctgaccgacgcgatcggccgcggcaccgcgcacgag
ctcgtcgagcgcgcggcgagtgaggcgggcgcgtcggaccggtcgttcgccgaggtgctg
tgcgacgatccgcaggtccgcgatcatctgggggccgacgccgtcggggagctgatggac
cccaccggctatctcggcagcgcaccggggctcgtcgaccgcgcgttgaacgcccacgac
cacaggagacccgcttga
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