Capillimicrobium parvum: DSM104329_01371
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Entry
DSM104329_01371 CDS
T08390
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sbae
Capillimicrobium parvum
Pathway
sbae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSM104329_01371 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbae03021
]
DSM104329_01371 (sigA_1)
Transcription machinery [BR:
sbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM104329_01371 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
UGS34987
UniProt:
A0A9E6XW97
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All DBs
Position
1386507..1387613
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AA seq
368 aa
AA seq
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MSVAELQELEEIKGLLAKGQQVGVLTHAEIATALSELDVDEADVEELNTFFESQEIELVE
DVDPATAAAAQVERAPDKRGGRRKAKTAIDLRPDMTTDSLQLFLKDIGKVRLLTAQEEVD
LAKRIERGDLDAKQKMVESNLRLVVSIAKNYRNQGLPFLDLIQEGTLGLVRAAEKFDYRK
GFKFSTYATWWIRQAIARALADKARTIRIPVHVVEKLNKIGRAERKLVTELGREPTADEI
AEVTGIDPEEVDSIKRSAQAPVSLEKPVGDEEESEFGQFIADERAESPYERAAEILTKEA
LREALENLSYRERRVLELRYGLGGEHPRTLDEVGRTFNVTRERIRQIENQSLKKLQSLAE
AQKLRDVA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgcagagctgcaggaactggaagagatcaagggtctgctcgccaagggccag
caggtgggcgtgttgacgcacgccgagatcgcgaccgcgctctccgaactcgacgtcgac
gaggccgacgtcgaggagctgaacaccttcttcgagtcccaggagatcgagctcgtcgag
gacgtcgatccggcgaccgccgcagccgcccaggtcgagcgcgcgccggacaagcggggc
gggcgccgcaaggccaagacggccatcgacctgcggcccgacatgacgacggactcgctg
cagctgttcctcaaggacatcggcaaggtccgtctgctcaccgcccaggaggaggtcgac
ctcgccaagcgcatcgagcgcggcgacctcgacgcgaagcagaagatggtcgagtcgaac
ctgcgcctcgtcgtctcgatcgcgaagaactaccgcaaccagggcctgccgttcctcgac
ctgatccaggaggggacgctcggcctggtccgcgccgcggagaagttcgactaccgcaag
ggcttcaagttctcgacctacgcgacctggtggatccgccaggcgatcgcccgtgcgctg
gccgacaaggcgcgcaccatccgcatcccggtccacgtcgtcgagaagctcaacaagatc
ggccgcgccgagcgcaagctcgtcaccgagctcggccgcgagcccaccgccgacgagatc
gccgaggtcacgggcatcgaccccgaggaggtcgactcgatcaagcgctcggcccaggcg
ccggtctcgctggagaagccggtcggcgacgaggaggagtccgagttcggccagttcatc
gccgacgagcgcgccgagtcgccgtacgagcgtgcggccgagatcctcacgaaggaggcg
ctgcgcgaggcgctggagaatctgtcctaccgcgagcgccgagttctcgagcttcgatac
ggcctgggcggagagcatccgcgcacgctcgacgaggtcgggcgcacgttcaacgtgacg
cgcgagcgcatccgccagatcgagaaccagtcgctgaagaagctgcagtcgctcgcggag
gcccagaagctccgcgacgtcgcctga
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