Capillimicrobium parvum: DSM104329_02637
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Entry
DSM104329_02637 CDS
T08390
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae03420
Nucleotide excision repair
sbae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM104329_02637 (pcrA)
03430 Mismatch repair
DSM104329_02637 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_02637 (pcrA)
Enzymes [BR:
sbae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM104329_02637 (pcrA)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM104329_02637 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DSM104329_02637 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_22
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
UGS36236
UniProt:
A0A9E6XXK6
LinkDB
All DBs
Position
2695286..2697466
Genome browser
AA seq
726 aa
AA seq
DB search
MPTPAADRLEELLAGLNEPQRDAVTHGDGPLLILAGAGSGKTRVLTHRLAWLVHSGRASH
QEVLAITFTNKAAQEMRNRVELLLGRRTRGMWVMTFHAACARMLRAEAPRLGYTRQFTIY
DQADARRLTKRCLEELNVDTKRFTPAAVHNQISDAKNKLRSADDVRELVGSRFEEIVGDV
YDAYEREMLRMNAMDFDDLLVRAVNVLELFDEVRERYQQTFRYVLVDEYQDTNHAQYKWL
QLLAGEHRNLAVVGDDAQSVYSFRGADIRNILDFQDDFPDAAVVKLEQNYRSTQTILDAA
NAVIRNNRGQIAKDLWTEVGQGDPIRVRELDDERSEARFVVGEVQRLIDEGVSRQEIAVF
YRTNAQSRVIEDVLVQRDIGYQVVGGTKFYERAEIKDALAYLTLLGNPQDVVAFTRVANT
PRRGIGQTSMSRVTAFATAMDMSVWDAAANPAAVPSLGAAAIKAFSRFMGTMEGLRERAA
QGVPVGDLLEAVLHETGYVDALEAERTFEAQGRLENLTELVNTAREFDASADPGEDTLDV
FLQQVALVADADTREDEGLVTLMTLHNAKGLEYEIVFITGFEDGVFPHSRALDEGALEEE
RRLCYVGITRAKRDLTLSYARQRMVFGSQQYGLRSRFLDEIPFELTDREQTDVVRQPGAR
VSWAASRADAPPPEAVDFRIGQDVAHAAFGEGVVTGIEPGGIVVIRFARDGSERKLMAEY
APITRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccgacccccgccgccgaccgcctggaggagctcctcgccgggctcaacgagccccag
cgcgacgcggtgacccacggcgacggcccgctgctcatcctcgccggcgccggctcgggc
aagacgcgcgtcctgacccaccgcctggcctggctcgtccacagcgggcgggccagccac
caggaggtgctggcgatcaccttcaccaacaaggccgcgcaggagatgcgcaaccgcgtc
gagctgctgctcggccgccgcacccggggcatgtgggtcatgacgttccacgccgcgtgc
gcgcggatgctgcgcgccgaggccccgcgcctcggctacacgcgccagttcacgatctac
gaccaggccgacgcccgccgcctgacgaagcgctgcctggaggagctcaacgtcgacacg
aagcgcttcacgccggccgccgtccacaaccagatctccgacgcgaagaacaagctgcgc
tccgccgacgacgtccgcgagctcgtcggctcgaggttcgaggagatcgtcggcgacgtc
tacgacgcctacgagcgcgagatgctgcggatgaacgcgatggacttcgacgacctgctc
gtgcgcgcggtcaacgtgctcgagctgttcgacgaggtccgcgagcgctaccagcagacc
ttccgctacgtcctcgtcgacgagtaccaggacaccaaccacgcccagtacaagtggctg
cagctgctcgccggcgagcaccgcaacctcgcggtcgtcggcgacgacgcgcagtcggtc
tactccttccgcggcgccgacatccgcaacatcctcgacttccaggacgactttccggac
gccgcggtggtcaagctcgagcagaactaccgctcgacgcagaccatcctcgacgccgcg
aacgcggtgatccgcaacaaccgcgggcagatcgccaaggacctgtggaccgaggtgggc
cagggcgatccgatccgggtgcgcgagctcgacgacgagcgctccgaggcgcggttcgtc
gtgggggaggtccagcggctcatcgacgagggcgtcagccgccaggagatcgcggtcttc
taccggaccaacgcgcagtcgcgggtcatcgaggacgtcctcgttcagcgcgacatcggc
taccaggtggtcggcggcacgaagttctacgagcgcgcggagatcaaggacgcgctcgcc
tatctcacgctgctcggcaacccacaggacgtcgtcgcgttcacccgcgtggcgaacacg
ccgcggcggggcatcgggcagacgtcgatgtcgcgcgtgaccgccttcgccaccgcgatg
gacatgagcgtctgggacgccgcagcgaacccggccgccgtccccagcctcggcgccgcc
gcgatcaaggccttcagccgcttcatgggcacgatggaggggctgcgcgagcgcgcggcg
cagggcgtcccggtcggtgacctgctcgaagcggtgctccacgagaccggctacgtcgac
gcgctggaggccgagcgcaccttcgaggcccagggccgcctcgagaacctcaccgagctc
gtcaacaccgcgcgcgagttcgacgcgtccgccgatccgggcgaggacaccctcgacgtc
ttcctgcagcaggtggcgctcgtggccgatgcggacacccgcgaggacgagggcctcgtg
acgctgatgacgctgcacaacgccaagggcctcgagtacgagatcgtcttcatcaccggc
ttcgaggacggcgtcttcccgcacagccgcgcgctcgacgagggcgcgctcgaggaggag
cggcggctgtgctacgtcggcatcacgcgcgccaagcgcgacctcacgctgtcctacgcg
cgccagcggatggtgttcggcagccagcagtacgggctgcgcagccgcttcctcgacgag
atccccttcgagctgaccgaccgcgagcagaccgatgtcgtccgccagcccggcgcgcgg
gtgtcctgggccgcctcgcgggccgacgccccgccgcccgaggcggtcgacttccgcatc
ggccaggacgtcgcgcacgccgcgttcggcgagggcgtcgtgaccgggatcgagcccggc
gggatcgtcgtcatccgcttcgcgcgcgacggctccgagcgcaagctgatggccgaatac
gcgccgatcacccgccggtga
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