Capillimicrobium parvum: DSM104329_03024
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Entry
DSM104329_03024 CDS
T08390
Symbol
sigF_3
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sbae
Capillimicrobium parvum
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbae03021
]
DSM104329_03024 (sigF_3)
Transcription machinery [BR:
sbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM104329_03024 (sigF_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_37
Sigma70_ECF
HTH_Crp_2
UPF0122
HTH_3
HTH_31
MarR
HTH_38
MarR_2
DUF134
GerE
DUF7343
DUF1492
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
UGS36616
UniProt:
A0A9E7C0Q2
LinkDB
All DBs
Position
3095414..3096196
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AA seq
260 aa
AA seq
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MTTSAPVSERWLLLRYRTTNDPVARERLVEAMMPLVRRLVSGYGHPRHREDLLQAACLGL
TKAIDRWDPLRGPELRTYAIPTMHGEVRRWLRDHSWAIHVPRPLQERVLTVTRATSGLRA
RDGRSPTAGQIAEHLTMPLEDVLGALQAGRAYGAASLEAPLGGDPEAGTLGDVIGDEDER
LDRAEQVASLSSLRDLLDDRDREVLRLRFVEDLTQSEIADRIGCSQMQVSRLLRRSIDRL
SARVTATGTEEVGAVAAPGS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacttcggccccggtctcggaacgctggctcctactgcgctaccggacgacgaac
gaccccgtggcgcgcgagcgcctcgtcgaggcgatgatgccactcgtgcgccggctcgtc
tcgggctacggccatccgcgtcaccgagaggacctcctgcaggcggcgtgcctcggcctg
acgaaggcgatcgaccgctgggaccccctccgcgggcccgagctgcgtacgtacgcgatc
ccgacgatgcacggcgaggtgcgccgctggctgcgcgaccactcgtgggccatccacgtg
ccgcggcccttgcaggagcgcgtcctgaccgtaacccgcgcgacgagcgggctgcgcgcg
cgcgatggccggtcgcccacggcgggccagatcgccgagcacctgacgatgcccctcgag
gacgtgctcggggcgctccaggccgggcgcgcctacggggccgcgtcgctggaggcgccg
ctgggcggcgacccggaggcgggcacgctcggcgacgtgatcggcgacgaggacgagcgc
ctcgaccgcgccgagcaggtggcgtcgctgagcagcctgcgcgatctgctcgacgaccgc
gaccgcgaggtgctgcgcctgcgcttcgtcgaagacctcacccagagcgagatcgccgac
cggatcggctgctcgcagatgcaggtgtcacgcctgctgcgacggtcgatcgaccggttg
agcgcccgggtgaccgcgacgggaacagaagaggtgggcgcggtggctgcccccgggtcc
tga
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