Capillimicrobium parvum: DSM104329_03039
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Entry
DSM104329_03039 CDS
T08390
Symbol
spoIIAB_2
Name
(GenBank) Anti-sigma F factor
Organism
sbae
Capillimicrobium parvum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
GAF_2
GAF
HATPase_c_2
GAF_3
PAS_3
HATPase_c
CodY
PAS
Autoind_bind
Motif
Other DBs
NCBI-ProteinID:
UGS36631
UniProt:
A0A9E7C0Q7
LinkDB
All DBs
Position
3109991..3112534
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AA seq
847 aa
AA seq
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MTVQRADDDRLTEETLRLALEGTQTGSWIWDVETDVISWSANLGPLHGMARGAAPSTFEQ
WLACVHPEDRDEVAALVSAALEGADSYACEFRLAGGEGGTERWLHSRAHVMRDGPGVPAR
AIVGLTTDVTARHRREEAMEVLADAGLALAATRTPEANLQRIADLVVPRLADWCAAHLLD
AEGRPTRVAIAHPGPDRVAWASTLEHRSDTARVGPAEVLRTGRSELYREITEQLLDTAAA
GDDEHRELLRSLGLRSAMVVPISAHERTLGTLTFLYAESNRRYDEDDLAVGEELGRRAGL
AIENATLQRAQQQANRRLRDLQSVADVALTHLELEAMLDELLRRLAAVLDSDVAKVLLFD
ERRRVLRVRAAIGLAGDVVDALEVPAGAGVAGRLAVAGRPLILSDLGGEDVVLEDLREPG
RALAGVPLRVDGEVTGVLIVSSREHPYDQDDLQLLELVADRVSLAIRQAELYEAARDAAL
SLQRSLLPDVPPVLAGLQVAARYLPGHDGDEVGGDWYDLFALPDGRVAIVVGDIVGRGLY
AAARMGRVRTALRAYAHDSASPADAVGRLDRLVAADDIAEFATLLVIFLDPQTGAARACS
AGHPPPLLVAAEDAETVAVAAGPPIGIGTAARRETALTVPAGATLVAYTDGLVERRTLPL
DAGIERVREAAAGGQAGESAEQLVERVVAEIIGVGGTDDDVAVVAVRRLGPQLQRTFAAE
PSAVAEARHEVTSFAHAHGFAQKMLGDLALAVSEACTNVVVHAYRDHPVPGPMHVAARMQ
DGALEVTVADEGGGVRPRGDSPGVGLGLQIMARTAESCEVRDAPGGGASLVLRFADPVAR
VREGRRL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcagcgcgccgatgacgaccgcctgaccgaggagacgctgcgcctcgccctc
gagggcacgcagacgggcagctggatctgggacgtcgagaccgacgtgatctcgtggtcg
gccaacctcggcccgctgcacggcatggcgcgtggcgccgccccgagcaccttcgagcag
tggctggcgtgcgtgcacccggaagaccgcgacgaggtggccgcgctcgtcagcgccgcg
ctggagggcgccgacagctacgcatgcgagttccgcctggcgggcggcgagggcggcacc
gagcgctggctgcactcgcgcgcccacgtgatgcgcgacgggccgggcgttcccgcccgc
gcgatcgtcgggctcaccacggacgtcaccgcccgccatcgccgcgaggaggcgatggag
gtgctcgccgacgcggggctggccctggccgccacgcgcacgcccgaggcgaacctgcag
cggatcgccgacctcgtcgtgccgcgcctggccgactggtgcgcggcccacctcctcgac
gcggagggccgtccgacacgggtcgccatcgcgcatcccggccccgaccgcgtcgcgtgg
gcgagcacgctcgagcaccggtcggacaccgccagggtcggacccgcggaggtgctgcgc
accggccggtccgagctgtaccgggagatcaccgagcagctgctcgacacggccgccgca
ggcgacgacgaacaccgcgagctcctgcgcagcctcggcctgcgctcggcgatggtcgtc
ccgatcagcgcccacgaacggacgctcggcacgctgaccttcctgtacgccgagtccaac
cgccgatacgacgaggacgacctcgcggtcggcgaggagctcggccgccgggcggggctg
gcgatcgagaacgccacgctccagcgcgcccagcagcaggccaaccgccgcctgcgcgac
ctgcagtcggtcgccgacgtggcgctcacccacctcgagctcgaggcgatgctcgacgag
cttctccggcgcctcgcggcggtcctcgactccgacgtcgccaaggtcctgctgttcgac
gagcggcgccgggtcctgcgcgtccgcgcggcgatcggcctcgccggcgacgtcgtcgac
gcactcgaggtgccggccggcgccggcgtcgccgggcgcctggccgtcgccggacggccg
ctgatcctctcggacctcggcggcgaggatgtcgtgctcgaggacctgcgcgagccgggc
cgcgcgctggccggcgtgccgctgcgcgtggacggcgaggtcaccggcgtgctcatcgtc
tccagccgggagcatccgtacgaccaggacgacctgcagctgctcgagctcgtcgccgac
cgcgtgagcctggcgatccgccaggccgagctctacgaggcggcccgggacgcggcgctc
tccctgcagcgcagcctgctgcccgacgtcccgcccgtcctggccggcctgcaggtcgcc
gcacgctacctccccggtcacgacggcgacgaggtcggcggcgactggtacgacctcttc
gcgctgcccgacggacgcgtggcgatcgtcgtcggcgacatcgtcggccgtgggctgtac
gccgctgcgcggatggggcgcgtgcgcaccgcgctgcgcgcatacgcgcacgactcggcc
tcccccgccgatgcggtcgggcggctcgaccggctggtcgcggcggacgacatcgccgag
ttcgccacgctgctcgtgatcttcctggacccgcagaccggcgcggcccgcgcgtgcagc
gccggacacccgccgccgctgctcgtcgccgccgaggatgccgagacggtggcggtggcc
gccggcccgcccatcgggatcgggacggccgcgcgccgggagaccgcactgaccgtgccg
gccggcgcgacgctcgtcgcctacacggacggcctggtcgagcgccggacgctgccgctc
gacgccgggatcgagcgcgtccgcgaggccgcggccggcgggcaggcgggagagagcgcc
gaacagctcgtcgagcgcgtcgtcgcggagatcatcggcgtgggcggcacggacgacgac
gtggcggtcgtggcggtgcgccggctcggcccccagcttcagcggacgttcgccgcggag
ccgtccgccgtggcggaggcgcgccacgaggtgacctcgttcgcccacgcccacgggttc
gcgcagaagatgctcggggacctcgccctcgcggtcagcgaggcgtgcacgaacgtcgtg
gtgcacgcgtaccgcgaccacccggtccccggcccgatgcacgtcgccgcgcgcatgcag
gatggcgcgctcgaggtgaccgtggcggacgagggcggcggcgtgcgtccgcgcggggac
agccccggcgtggggctcggcctgcagatcatggcccgcaccgccgagtcctgcgaggtg
cgcgacgcgccgggcggcggcgcctccctggtcctgcgcttcgccgatcccgtcgcgcgg
gtgcgggagggccggcggctgtga
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