Capillimicrobium parvum: DSM104329_03066
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Entry
DSM104329_03066 CDS
T08390
Symbol
dapE_2
Name
(GenBank) Putative succinyl-diaminopimelate desuccinylase DapE
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00300
Lysine biosynthesis
sbae01100
Metabolic pathways
sbae01120
Microbial metabolism in diverse environments
sbae01230
Biosynthesis of amino acids
Module
sbae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSM104329_03066 (dapE_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbae01002
]
DSM104329_03066 (dapE_2)
Enzymes [BR:
sbae01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DSM104329_03066 (dapE_2)
Peptidases and inhibitors [BR:
sbae01002
]
Metallo peptidases
Family M20
DSM104329_03066 (dapE_2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UGS36658
UniProt:
A0A9E7C1P9
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Position
3134583..3135650
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AA seq
355 aa
AA seq
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MPDLPGRLARRTLELVDLPSVSRSEQRLAAHVLEVLRSGGADCRAAGDTCVLAGATERGA
RPLVLLAGHLDTVPEQGNLPGAIVDGRVVGLGAADMKGADAVMIELAIALAGRETAVDVG
FVFFGREELPFAESALTPLLEREPGLAAADLVVVMEPTANALQLGCLGNLNATWTFSGRA
GHSARPWLADNAIHRAAEGIHALAQVGPVEHRFGGLTYTEVVSATTISGGIAQNVVPDRA
VAQVNYRFPPGRGAAEAEAQVRAWCEPYGAIEITGIAPSGPVPDANPLVARLQESGAGEV
AAKQAWTPVAEFGLAGVDAVNFGPGDPVHAHRADEEVSVAALVECFSVLERFLCG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacctccccggccgcctcgcccgccgtaccctggagctcgtcgacctgccgtcg
gtgtcgcgcagcgagcagcggctggccgcccatgtgctcgaggtcctgcgctccggcggg
gccgactgccgggcggcgggcgacacgtgcgtgctggccggtgcgaccgagcgcggcgcg
cggccgctcgtcctgctcgccggccacctggacacggtgcccgagcagggcaacctgccc
ggcgcgatcgtggacggtcgcgtcgtcgggctcggcgcggcggacatgaagggcgcggac
gcggtgatgatcgagctcgccatcgccctggcgggccgcgagaccgccgtcgacgtcggc
ttcgtcttcttcggccgcgaggagctgccgttcgccgagagcgcgctgacgccgctgctc
gagcgcgagccgggtctcgcggcggccgacctcgtcgtggtgatggagccgaccgcgaac
gcgctgcagctcggctgcctgggcaacctcaacgcgacctggacgttcagcggacgggcc
gggcactcggcgcgcccttggctggccgacaacgcgatccaccgggccgccgagggcatc
cacgcgctcgcgcaggtcgggccggtcgagcaccgcttcggcgggctgacctacaccgag
gtcgtgtcggcgacgacgatctccggcggcatcgcccagaacgtcgtgcccgaccgggcg
gtggcgcaggtcaactaccgcttcccgcccggacgcggcgcggccgaggccgaggcgcag
gtgcgggcgtggtgcgagccgtacggcgcgatcgagatcaccgggatcgcaccgtcgggg
ccggtgcccgacgccaatccgctggtcgcgcggctacaggagtcgggcgccggcgaggtc
gcggccaagcaggcgtggacgccggtcgccgagttcggcctcgccggcgtcgacgcggtg
aacttcggccccggcgatcccgtgcacgcgcaccgcgccgacgaggaggtctcggtcgcc
gcgctcgtcgagtgcttctccgtgctggagcggttcctgtgcgggtga
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