Capillimicrobium parvum: DSM104329_03259
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Entry
DSM104329_03259 CDS
T08390
Symbol
pdxS
Name
(GenBank) Pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00750
Vitamin B6 metabolism
sbae01100
Metabolic pathways
sbae01240
Biosynthesis of cofactors
Module
sbae_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DSM104329_03259 (pdxS)
Enzymes [BR:
sbae01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DSM104329_03259 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
His_biosynth
TetR_C_27
Dus
IGPS
DHO_dh
NanE
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
UGS36848
UniProt:
A0A9E6XZE7
LinkDB
All DBs
Position
complement(3339764..3340651)
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AA seq
295 aa
AA seq
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MLRDESTFRVKAGLAEMLKGGVIMDVVNAEQAKIAEDAGASAVMALERVPADIRRDGGVA
RMSDPIMIKGIQEAVTIPVMAKARIGHFAEAQVLEALEVDYIDESEVLTPADEAHHIDKW
AFKVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDIVEAVRHLRSIRGEIRRLGTLDE
MELFGAAKALQSPVELVRSVAQAGALPVPLFCAGGIATPADASLVMQLGAQAVFVGSGIF
KSDDPAPRARAIVEATTHFADPERVAKASEGLGRAMESLETRKLDESQLLAGRGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcgagacgagtccacgttccgcgtcaaggccggcctggccgagatgctcaagggc
ggcgtcatcatggacgtcgtcaacgccgagcaggcgaagatcgccgaggatgccggcgcc
tccgccgtgatggcgctggagcgcgtcccggccgacatccgccgtgacggcggcgtcgcc
cggatgagcgatccgatcatgatcaagggcatccaggaggccgtcacgatcccggtgatg
gccaaggcgcgcatcggccacttcgccgaggcccaggtcctcgaggcgctcgaggtcgac
tacatcgacgagtcggaggtcctcacgccggccgacgaggcgcaccacatcgacaagtgg
gcgttcaaggtgccgttcgtgtgcggggccacgaacctgggggaggcgctgcggcgcatc
tccgagggcgcggcgatgatccgctccaagggcgaggcgggcaccggcgacatcgtcgag
gccgtgcgccacctgcggtccatccgcggcgagatccgccggctcgggacgctcgacgag
atggagctcttcggcgccgccaaggcgctgcagtcgccggtcgagctggtgcgctcggtc
gcgcaggcgggggcgctgccggtgccgctgttctgcgcgggcgggatcgccacgccggcc
gatgcctcgctggtcatgcagctcggcgcgcaggccgtcttcgtcggctcgggcatcttc
aagagcgacgacccggcgccgcgggcgcgggcgatcgtcgaggcgacgacccacttcgcc
gaccccgagcgggtcgccaaggcgtcggaaggcctcggccgcgcgatggagagcctcgag
acccgcaagctcgacgagtcgcagctgctcgccggccgcggttggtag
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