Capillimicrobium parvum: DSM104329_03886
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Entry
DSM104329_03886 CDS
T08390
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae03030
DNA replication
sbae03410
Base excision repair
sbae03420
Nucleotide excision repair
sbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM104329_03886 (polA_1)
03410 Base excision repair
DSM104329_03886 (polA_1)
03420 Nucleotide excision repair
DSM104329_03886 (polA_1)
03440 Homologous recombination
DSM104329_03886 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbae03032
]
DSM104329_03886 (polA_1)
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_03886 (polA_1)
Enzymes [BR:
sbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM104329_03886 (polA_1)
DNA replication proteins [BR:
sbae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DSM104329_03886 (polA_1)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DSM104329_03886 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM104329_03886 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UGS37470
UniProt:
A0A9E7C1G7
LinkDB
All DBs
Position
complement(4011567..4014158)
Genome browser
AA seq
863 aa
AA seq
DB search
MSTDGAASELYLIDGNSLVYRAFFALPESIATSTGFPTNAIFGFASMLVKLITDHGVVPT
VVVWDRGSSGRKELYGEYKGHRPTKPDLLGQQYPHMEPLVEAFGYTNYGVDGYEADDVIA
TIAERAKDAGLAVTIVTGDRDAFQLVDDRVRVMATSRGITETKLYGPEDVEERYGIGPEL
IPDFYGLKGDTSDNIPGVPGIGDKTAAQLLQRFGTLEEVLDHVDDVSGAKRQENLREHAD
AARISKQLATAQREVPGVELDITAALAREPDRSRLREVFREFELRDPLRRLEEALGDPDA
AAPAPVAETTLPATLREGTLADTVSLKGELTVLVEEAEPPEGELLAAAPWRFAVAGAGGA
VVAGGTDSPAAVVAALGDRPVIAHDAKALGAVPANLVHDTLLAAYLLEPARRGYPLRELV
EERGLAADLEDPLAARAVEAAALAAWQREQLQDRGLTLLMRDVELPLVPVLRAMEIDGIR
LNTHQLAEVADRVHGELRDLEDDIYRLADTEFTIGSPQQLGEVLFVKLGLSKKRRGKTGF
STDARVLQQIRDEHPIVPKIERWRELNQLAKTYLDVLPQMVDEQSRLHTTFVQAAATTGR
LASTNPNVQNVPVRTPLGREIRGCFEAAPGNVLVSADYSQVELRVLAHVADEPVLKEIFV
RGEDVHTATASQVFEKAPEDLTPMDRSKAKMINYGIVYGLSDYGLADRLNIPREEAKAVI
DAYLARFPRVAAFIEGTIEQAKELGYVTTLYGRRRQIPELRARNYQVRTLGERLAVNTVI
QGTAADVIKLAMIGAARSLSGSHPPLRSRLILTIHDELLFEGPPEEEAAVRELIEREMLA
PWEDRDPPLEVDVGAGRTWLEAK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgacggcgctgcgagcgagctctacctgatcgacggcaactcgctcgtctac
cgggcgttcttcgcgcttccggagtcgatcgccacctcgacgggctttccgacgaacgcg
atcttcgggttcgcgtcgatgctggtgaagctcatcaccgaccacggcgtcgtccccacc
gtcgtcgtgtgggaccggggatcgagcgggcgcaaggagctctacggcgagtacaagggc
caccggccgacgaagcccgacctgctcggccagcagtacccgcacatggagccgctcgtc
gaggcgttcggctacacgaactacggcgtcgacggctacgaggccgacgacgtcatcgcc
acgatcgccgagcgggccaaggacgccggtctcgcggtcacgatcgtcacgggcgaccgc
gacgccttccagctcgtcgacgaccgcgtgcgcgtcatggcgacgtcgcgcggcatcacc
gagacgaagctctacggccccgaggacgtcgaggagcgctacggcatcgggcccgagctg
atccccgacttctacggcctgaagggcgacacgtccgacaacatccccggcgtcccgggc
atcggcgacaagacggccgcccagctgctgcagcgcttcggcacgctcgaggaggtcctc
gaccacgtcgacgacgtctcgggcgccaagcgccaggagaacctgcgcgagcacgccgac
gccgcgcgcatctccaagcagctcgcgaccgcgcagcgcgaggtgccgggcgtcgagctc
gacatcacggcggcgctcgcgcgcgagccggaccgctcacggctgcgcgaggtcttccgc
gagttcgagctgcgcgacccgctgcgccgcctggaggaggcgctcggcgacccggacgcc
gccgcgccggcgccggtggccgagacgacgctgcccgccacgctgcgcgagggcacgctc
gccgacacggtgtccctgaagggcgagctcacggttctcgtggaggaggccgagccgccc
gagggcgagctgctcgccgccgcgccgtggcggttcgccgtcgcgggcgccggcggagcg
gtggtggccggcggcacggacagcccggccgccgtcgtcgccgcactcggcgaccggccc
gtcatcgcccacgacgccaaggcgctcggcgccgtcccggcgaacctcgtccacgacacc
ctgctcgccgcgtacctgctcgagcccgcccgccgcggctacccgctgcgcgagctcgtc
gaggagcgcggcctggccgcggacctcgaggacccgctcgccgcgcgcgcggtcgaggcc
gccgcgctcgcggcctggcagcgcgagcagctgcaggaccgcgggctgacgctgctcatg
cgcgacgtcgagttgccgctcgtcccggtgctgcgcgcgatggagatcgacggcatccgg
ctcaacacgcaccagctggccgaggtcgccgaccgcgtccacggcgagctgcgcgacctc
gaggacgacatctaccggctcgcggacacggagttcacgatcggctcgccccagcagctg
ggggaggtcctgttcgtcaagctcggcctgtcgaagaagcgccgcggcaagaccggcttc
tccaccgacgcacgcgtcctgcagcagatccgcgacgagcatccgatcgtgccgaagatc
gagcgctggcgcgagctcaaccagctcgccaagacctacctcgacgtgctgccgcagatg
gtcgacgagcagtcgcgcctgcacaccacgttcgtgcaggcggccgcgaccaccggccgc
ctggcctcgacgaacccgaacgtccagaacgtcccggtccgcaccccgctcggccgtgag
atccgcggctgcttcgaggcggcgcccggcaacgtcctcgtctccgccgactactcgcag
gtcgagctgcgcgtgctcgcccacgtcgccgacgagcccgtgctcaaggagatcttcgtc
cgcggcgaggacgtccacacggccacggcgtcgcaggtcttcgagaaggcgccggaggac
ctcaccccgatggaccgctcgaaggccaagatgatcaactacgggatcgtctacggcctg
agcgactacggcctggccgaccggctgaacatcccgcgcgaggaggccaaggcggtcatc
gacgcgtacctcgcccgcttcccgcgcgtcgccgcgttcatcgaggggacgatcgagcag
gccaaggagctcgggtacgtgacgacgctctacggccgccggcgccagatccccgagctg
cgggcgcgcaactaccaggtgcgcacgctcggcgagcggctagcggtcaacacggtcatc
cagggcaccgccgccgacgtcatcaagctggcgatgatcggcgctgcgcgttcgttgtcg
ggatcgcacccacccctgcgctcccggctcatcctcacgatccatgacgagctgctgttc
gagggcccgccggaggaggaggccgcggtgcgcgagctgatcgagcgcgagatgctggcg
ccctgggaggaccgcgacccgccgctcgaggtcgacgtcggcgcagggaggacgtggctg
gaggcgaagtag
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