Capillimicrobium parvum: DSM104329_04107
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Entry
DSM104329_04107 CDS
T08390
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sbae
Capillimicrobium parvum
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbae03032
]
DSM104329_04107 (hup)
03036 Chromosome and associated proteins [BR:
sbae03036
]
DSM104329_04107 (hup)
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_04107 (hup)
DNA replication proteins [BR:
sbae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSM104329_04107 (hup)
Chromosome and associated proteins [BR:
sbae03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSM104329_04107 (hup)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSM104329_04107 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
UGS37687
UniProt:
A0A9E6Y146
LinkDB
All DBs
Position
complement(4234178..4234456)
Genome browser
AA seq
92 aa
AA seq
DB search
MTKSEFVDHIAQKSGLAKTDAGKAVDAVIDTIQDTLKRGGEVNFSGFGKFHVTERGAREG
VHPRTGEKITIAAAKLPKFTAGSGLKKSVKGE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaagtccgagttcgtcgatcacatcgcccagaagtccggtctggccaagaccgac
gccggcaaggccgtcgatgcggtgatcgacaccatccaggacaccctgaagcgcggcggc
gaggtgaacttctcagggttcgggaagttccacgtgaccgagcggggtgctcgcgagggc
gtgcatccccgtaccggcgagaagatcaccatcgcggcggccaagctgccgaagttcacc
gccggttcgggcctcaagaagtcggtcaagggcgagtag
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