Capillimicrobium parvum: DSM104329_04252
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Entry
DSM104329_04252 CDS
T08390
Symbol
ku_1
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
sbae
Capillimicrobium parvum
Pathway
sbae03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DSM104329_04252 (ku_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_04252 (ku_1)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DSM104329_04252 (ku_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UGS37831
UniProt:
A0A9E7C1W8
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All DBs
Position
complement(4390874..4391728)
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AA seq
284 aa
AA seq
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MPRAIWTGAISFGLVTVPVRLYSAVNRKTVSFNQLDSSDNGRIAQKRINPRTGEEVPYER
IVKGFAVAPDSYVVITNEELDALEPEKTRTIDIEDFVDQSEIDPIFYDHPYYLAPGPGGA
KPYRLLLDAMRETNKVAIARVVIRSKESLVAIRPAGDVLEMSTMLFADEVADPTRIDELP
DPDDVKTTDKELSIAKQLVDSLAGPFEPGKYKDEYREQVLALIERKAAGEEIAVQEAPEA
APTEVPDLMSALQASLDAVRGADKKDAPKRKSPAASRQKSAAKG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgcgatctggaccggtgccatctcgttcgggctcgtcaccgtgcccgtccgc
ctctacagcgccgtcaaccgcaagacggtcagcttcaaccagctcgactcgagcgacaac
ggccgcatcgcccagaagcggatcaacccgcgcacgggcgaggaggtgccctacgagcgc
atcgtcaagggcttcgccgtcgcacccgacagctacgtcgtcatcacgaacgaggagctc
gacgcgctcgagccggagaagacgcggacgatcgacatcgaggacttcgtcgaccagtcc
gagatcgacccgatcttctacgaccacccgtactacctcgcgcccgggccgggcggggcg
aagccgtaccgcctgctgctcgacgcgatgcgcgagacgaacaaggtggcgatcgcccgg
gtcgtgatccgctcgaaggagagcctggtcgcgatccgccccgccggggacgtgctcgag
atgtcgaccatgctgttcgccgacgaggtcgccgacccgacgcgcatcgacgagctgccc
gatcccgacgacgtcaagacgacggacaaggagctctcgatcgccaagcagctcgtcgac
tcgctcgccgggccgttcgaacccggcaagtacaaggacgagtaccgcgagcaggtgctg
gccctgatcgagcgcaaggcggccggcgaggagatcgccgtccaggaggcgccggaggcg
gcgccgaccgaggtgcccgatctcatgagcgcgctgcaggcgtcgctggacgcggtgcgc
ggggccgacaagaaggacgcgccgaagcgcaagtcgcccgccgcttcacgtcagaagagc
gccgccaaggggtaa
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