Capillimicrobium parvum: DSM104329_04351
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Entry
DSM104329_04351 CDS
T08390
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSM104329_04351 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbae01007
]
DSM104329_04351 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbae03016
]
DSM104329_04351 (lysS)
Enzymes [BR:
sbae01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DSM104329_04351 (lysS)
Amino acid related enzymes [BR:
sbae01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DSM104329_04351 (lysS)
Transfer RNA biogenesis [BR:
sbae03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSM104329_04351 (lysS)
Prokaryotic type
Other AARSs
DSM104329_04351 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF6286
Motif
Other DBs
NCBI-ProteinID:
UGS37929
UniProt:
A0A9E6Y0N6
LinkDB
All DBs
Position
complement(4492538..4493989)
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AA seq
483 aa
AA seq
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MAQEPPDLFAVRRAKLDRLRADGIDPFPHAYPGVMPVSVIAERHADLPAGEETEARYRVA
GRLAARRGQGRMAFLDLVDRSGRLQLQARLDVLGEERMERLLALDLGDLIGVDGTALRSR
RGEMTLRVDDFAVLAKSLRPPPDKHHGLADVETRLRQRELDLIANEEARALFMLRAKVIA
AVRRALDADGFVEVETPVLQPLYGGALARPFVTHFNALDRPFYLRIATELYLKRLIVGGL
ERVYELGKDFRNEGLSPKHNPEFTMVEWYEAYADYGDAARRLETLVDDVAREVGYAGEID
FTPPWRRVTLRDAILEKAGVDVLAHRERHELAVAIGDRLPTAERTWPQLVDDLLSKFVEP
ELIQPTIVMDYPVELSPFAKAHRTEPGLVERFEAFVSGMEIANAFSELNDPDDQRARFEA
QVRYAAQGDEEAQPFDELFLTALEHGMPPTGGLGMGIDRLVMVLGERRSIRDVVLFPAMR
DQS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggagccgccggacctcttcgccgtccgccgcgcgaagctcgaccggctgcgc
gcggacggcatcgacccgttcccgcacgcctacccgggcgtcatgccggtgagcgtgatc
gccgagcgccacgccgacctgcccgccggagaggagaccgaggcccgctaccgggtggcg
ggccggctcgcggcgcggcgcggccagggccggatggcgttcctcgacctcgtcgaccgc
tcgggccggctgcagctgcaggcgcggctcgacgtgctcggcgaggagcgcatggagcgc
ctgctggccctcgacctcggcgacctcatcggcgtcgacggcaccgcgctgcgctcgcgg
cgcggcgagatgacgctgcgcgtcgacgacttcgccgtgctggcgaagtcgctgcgccct
ccgcccgacaagcaccacggcctcgcggacgtcgagacgcgcctgcgccagcgcgagctc
gacctcatcgccaacgaggaggcgcgggccctgttcatgctgcgcgccaaggtcatcgcg
gcggtccggcgggcgctcgacgccgacggcttcgtcgaggtcgagacaccggtcctgcag
ccgctctacggcggcgcgctggcccggccgttcgtcacgcacttcaacgcgctcgaccgg
ccgttctacctgcgcatcgccaccgagctctacctcaagcggctcatcgtcggcggcctc
gagcgcgtctacgagctcggcaaggacttccgcaacgaggggctgtcgccgaagcacaac
cccgagttcacgatggtcgagtggtacgaggcgtacgcggactacggcgacgcggcccgc
cggctcgagacgctcgtcgacgacgtcgcgcgcgaggtcggctacgcgggcgagatcgac
ttcacgccgccgtggcggcgcgtgacgctgcgcgacgccatcctcgagaaggccggcgtg
gacgtcctcgcccaccgcgagcgccacgagctcgcggtcgcgatcggcgaccgcctgccg
accgccgagcgcacgtggccgcagctcgtcgacgacctgctgtcgaagttcgtcgagccc
gagctgatccagccgacgatcgtcatggactatcccgtggagctgtcgccgttcgccaag
gcgcaccggaccgagcccggcctggtcgagcgcttcgaggcgttcgtcagcggcatggag
atcgccaacgcgttcagcgagctcaacgaccccgacgaccagcgggcgcgcttcgaggcg
caggtccgctacgcggcgcagggcgacgaggaggcgcagccgttcgacgagctgttcctc
accgcgctcgagcacgggatgccgccgaccggcggcctgggcatgggcatcgaccggctc
gtgatggtgctcggcgagcgccgctcgatccgcgacgtcgtgctcttccccgcgatgcgc
gaccagtcgtag
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