Capillimicrobium parvum: DSM104329_04512
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Entry
DSM104329_04512 CDS
T08390
Symbol
alkA_3
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM104329_04512 (alkA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_04512 (alkA_3)
Enzymes [BR:
sbae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DSM104329_04512 (alkA_3)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM104329_04512 (alkA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
CecR_C
DUF977
Motif
Other DBs
NCBI-ProteinID:
UGS38090
UniProt:
A0A9E6Y0V9
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All DBs
Position
4648490..4649113
Genome browser
AA seq
207 aa
AA seq
DB search
MTPGTARAADEHLRASDPVMAALIEAFGPLPERAPSDDHYAAIVRSIVGQQLSTKAARAI
HARLLDVFGGNEPSPRQILAADPEELRAAAGLSRAKVAFLRSLAEHIESGELELDRLDEL
PDEEVTAELVAVKGVGVWTAHMFLMFQLERPDVLPVGDLGIRRAVERAYRLREPPSATEL
EALAEPWRPWRTVACRYLWRSLDNAPE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggggacggcgcgggcggcggacgagcacctgcgcgcgagcgatccggtgatg
gccgcgctcatcgaggccttcgggccgctgcccgagcgcgcgccgtcggacgaccactac
gccgcgatcgtgcgctccatcgtcggccagcagctctcgacgaaggcggcgcgggccatc
cacgcgcggctgctcgacgtcttcggaggcaacgagccgtccccgcggcagatcctcgcc
gccgacccggaggagctgcgcgcggccgcggggctgtcgcgggcgaaggtcgccttcctg
cggtccctcgccgagcacatcgagtcgggcgagctcgagctcgaccggcttgacgagctg
cccgacgaggaggtcaccgccgagctggtggcggtcaagggcgtcggcgtgtggaccgcc
cacatgttcctcatgttccagctcgagcgcccggacgtcctgccggtcggggatctcggc
atccggcgcgccgtcgagcgggcctaccgcctgcgcgagccgcccagcgcgaccgagctg
gaggcgctcgccgagccgtggcgcccgtggcgcacggtggcctgccggtacctctggcgg
tcgttggacaacgcgccggaatga
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