Capillimicrobium parvum: DSM104329_04571
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Entry
DSM104329_04571 CDS
T08390
Symbol
tmung
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM104329_04571 (tmung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_04571 (tmung)
Enzymes [BR:
sbae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DSM104329_04571 (tmung)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM104329_04571 (tmung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UGS38148
UniProt:
A0A9E6Y1R2
LinkDB
All DBs
Position
complement(4700345..4700890)
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AA seq
181 aa
AA seq
DB search
MTLDDIAQDIRTHTGCGSEPCETCRNFVPGEGPADARVVIVGEAPGASEDRTGRPFVGNA
GKLLDSLLEAAGLLREDVFITNVVKARPPGNRDPKAPEVAHHRPWLEAQLEIVEPDLVVP
LGRHALRHFAAGAQISKVHGTLVGERLFPLYHPAAALHNPRLRETLIADARALGAQLQQK
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctggacgacatcgcacaggacatccggacccacacgggctgcggcagcgagccg
tgtgagacgtgccggaacttcgtcccgggcgagggtccggcggacgcgcgcgtggtgatc
gtgggggaggccccgggggcgagcgaggaccggaccgggcgcccgttcgtcggcaacgcc
ggcaagctcctcgacagcctgctcgaggccgccgggctcctccgcgaggacgtcttcatc
acgaacgtcgtgaaggcgcggccgcccggcaaccgggatccgaaggcgccggaggtcgcg
caccaccggccgtggctggaggcccagctcgagatcgtcgagcccgacctggtcgtgccg
ctcggccgccatgcgctgcgccacttcgccgcgggcgcgcagatctcgaaggtccacggc
acgctcgtcggcgagcgcctcttcccgctgtaccacccggcggcggccctgcacaacccg
cgcctgcgggagacgctcatcgccgacgcccgtgcgctcggcgcgcagttgcagcagaag
aattga
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