Capillimicrobium parvum: DSM104329_04637
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Entry
DSM104329_04637 CDS
T08390
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sbae
Capillimicrobium parvum
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbae03016
]
DSM104329_04637 (truA)
Enzymes [BR:
sbae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DSM104329_04637 (truA)
Transfer RNA biogenesis [BR:
sbae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSM104329_04637 (truA)
Prokaryotic type
DSM104329_04637 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UGS38213
UniProt:
A0A9E6Y248
LinkDB
All DBs
Position
complement(4764793..4765521)
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AA seq
242 aa
AA seq
DB search
MASIRLTIAYDGTPFAGWARQPGQLTVQGELERALATVCRGPVALTVAGRTDRGVHAWRQ
VASYPGALPDRTAGVNALLPPEIVLLDAQPEPDGFDARRDARSRTYCYRVLARRARDPFE
QRRALHWPYPADLGALEACAAALVGEHDFTAFTPTETDHVRFERVVSDARWDRDGDILRF
WITADAFMRNMNRALVGTMLEVAGGRRTLEAFTELLEGRPRAQAGPTAPPHGLYLAGVSY
DD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgatccgcctgacgatcgcctacgacggcacgccgttcgccggctgggcccgc
cagccgggccagctcaccgtgcagggcgagctcgagcgggcgctcgcgaccgtctgccgg
gggcccgtggcgctcaccgtcgccgggcgcaccgaccgcggcgtgcacgcgtggcggcag
gtcgcctcgtaccccggcgcgcttccggatcgcaccgccggcgtcaacgcgctgctgccg
ccggagatcgtgttgctcgacgcgcagcccgagcccgacggcttcgacgcccgccgcgac
gcccgctcgcggacgtactgctaccgcgtgctggcccgccgcgcccgcgacccgttcgag
cagcgccgggcgctgcactggccctacccggccgacctcggcgcgctcgaggcctgtgcg
gccgcgctggtcggcgagcacgacttcaccgcgttcacgcccaccgagaccgatcacgtg
cgcttcgagcgcgtcgtgtccgatgcgcgctgggaccgcgacggcgacatcctgcgcttc
tggatcaccgccgacgcgttcatgcgcaacatgaaccgcgcgctcgtgggcacgatgctc
gaggtggccggcggccggcgcacgctggaggcgttcaccgagctgctcgaggggcgcccg
cgggcgcaggcgggcccgacggccccgccgcacggcctgtacctcgcgggcgtcagctac
gacgactga
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integrated database retrieval system
