Capillimicrobium parvum: DSM104329_04805
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Entry
DSM104329_04805 CDS
T08390
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM104329_04805 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbae03400
]
DSM104329_04805 (xthA)
Enzymes [BR:
sbae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DSM104329_04805 (xthA)
DNA repair and recombination proteins [BR:
sbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DSM104329_04805 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TCAF_N
TrbH
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
UGS38381
UniProt:
A0A9E6Y1S8
LinkDB
All DBs
Position
4928825..4929760
Genome browser
AA seq
311 aa
AA seq
DB search
MIASALPTVAGSVLATVAYGKGRVRIATWNVNSVKQRLPRLLPWLDERRPDVVCLQETKL
ADDAFAQLLAEELGARGYEVAAHGEATWNGVAILSRAGLDDVAVGLPGGPGFPHPEARAV
SATCGGLRFVSVYVPNGRTPDSDHYRYKLAWLAALRDMVAAGDPTSTVVLGDVNIAPADE
DVFDPEAYVGQTHVTAPEREALAALQSVGLHDVVRDRWPDKRVFTYWDYRAGMFHQDLGM
RIDLVLTGDAVAARVAAAWVDRQARKGKGPSDHAPVIVDLDDAPDGDIGPVVPPPSAPAA
RRGAKKLPQAP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcaagcgcccttccgacggtcgcgggctcggttctcgcaacagtcgcgtacggt
aagggccgcgtgcgcatcgcgacctggaacgtcaactcggtcaagcagcggctgccgcgc
ctgctgccgtggctggacgagcgtcgtcccgacgtcgtctgcctgcaggagaccaagctc
gccgacgacgcgttcgcgcagctgctcgccgaggagctcggcgcccgcggatacgaggtc
gccgcgcacggggaggcgacctggaacggcgtggcgatcctctcgcgcgccgggctcgac
gacgtcgccgtcgggctgcccggcggccccggcttcccgcacccggaggcccgcgcggtg
tcggccacctgcggcggcctgcggttcgtctccgtctacgtccccaacgggcgcacgccg
gactccgaccactaccgctacaagctcgcctggctcgccgcactgcgcgacatggtcgcc
gccggggaccccacctcgacggtggtgctcggcgacgtcaacatcgcgcccgccgacgag
gacgtgttcgatcccgaggcctacgtcggccagacgcacgtcacggcacccgagcgcgag
gcgctggccgcgctgcagtcggtcggcttgcacgacgtggtgcgcgaccgctggccggac
aagcgcgtcttcacgtactgggactaccgcgcgggcatgttccaccaggacctcggcatg
cggatcgacctggtcctgaccggcgacgcggtggccgcgcgcgtcgccgcggcgtgggtc
gaccgccaggcgcgcaagggcaaggggccgagcgaccacgcgccggtgatcgtcgacctc
gacgatgcgccggacggcgacatcgggccggtcgtgccgccaccgtcggcgcccgccgcg
cgccgcggcgcgaagaagctgccgcaggcgccgtag
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