Capillimicrobium parvum: DSM104329_04839
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Entry
DSM104329_04839 CDS
T08390
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sbae
Capillimicrobium parvum
Pathway
sbae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSM104329_04839 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbae03021
]
DSM104329_04839 (sigA_2)
Transcription machinery [BR:
sbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM104329_04839 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
HTH_20
SgrR_N
Motif
Other DBs
NCBI-ProteinID:
UGS38411
UniProt:
A0A9E6Y1V1
LinkDB
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Position
complement(4959117..4960253)
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AA seq
378 aa
AA seq
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MTDKADVLLADEAPIHELEELQPLIVGGHERGFLTIEEITTCLEEIEVTKEQISELHTHL
VDQGIDIVGADGKPVAGGSEPKRDKDDDAVDAAPKKPEIDLTVEPSLDSLRLYLRSIGRV
PLLTAQEEVSLAKRIERGDMAAKQQMVEANLRLVVSIAKGYLGRGLTFLDLIQEGSLGLI
RAVEKFDYRRGYKFSTYATWWIRQAVTRAIADKGRTIRIPVHMVEKLNKVVHVERQLVQS
LGREPTPEEIARELECSQREVRDILRMSQQPISLEKPIGEEDESELGDFVEDQTAESPFE
LASENLRRENVRKALAALPQREREVIEMRFGLTGERPRTLEEVGRAFNVTRERIRQIENH
TLKKLESLPEAQRLRDAG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ttgacggacaaggctgacgtactgctcgcggacgaggctccgattcacgagctcgaggag
ctccagccgctcatcgttggcggccacgagcgcggatttcttaccatcgaggagatcacg
acgtgcctcgaggagatcgaggtcacgaaggagcagatctccgagctgcacacccacctc
gtcgatcaggggatcgacatcgtgggggcggacggcaagcccgtcgccggaggctccgag
cccaagcgcgacaaggacgacgacgccgtcgacgcggcgccgaagaaaccggagatcgac
ctcacggtcgagccgtcgctggactcgctgcggctctacctgcgcagcatcggccgtgtg
ccgctgctgacggcacaggaggaggtgtcgctggccaagcgcatcgagcgcggcgacatg
gcggccaagcagcagatggtcgaggcgaacctgcggctcgtcgtgtcgatcgccaagggc
tatctcggccggggcctgacgttcctggacctcattcaggagggatcgctgggtctcatc
cgcgcggtggagaagttcgattaccgccgcggctacaagttctcgacgtacgccacctgg
tggatccgccaggcggtgacgcgggcgatcgccgacaagggccgcaccatccgcatcccc
gtgcacatggtcgagaagctcaacaaggtcgtccacgtcgagcgccagctcgtgcagtcg
ctcggccgcgagccgactcccgaggagatcgcgcgcgagctcgagtgctcgcagcgggag
gtgcgcgacatcctgcgcatgtcccagcagccgatctcgctcgagaagccgatcggtgag
gaggacgagtccgagctcggcgacttcgtcgaggaccagaccgccgagtcgccgttcgag
ctggcgtcggagaacctgcgccgcgagaacgtgcgcaaggcgctggcggcactgccgcag
cgcgagcgcgaggtcatcgagatgcgcttcgggctgaccggcgagcgtccgcggacgctc
gaggaggtcggccgcgcgttcaacgtcacgcgcgagcggatccgccagatcgagaaccac
accctgaagaagctcgagtcgctgcccgaggcgcagcggctgcgcgacgcgggctga
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