Capillimicrobium parvum: DSM104329_05043
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Entry
DSM104329_05043 CDS
T08390
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00521
Streptomycin biosynthesis
sbae00523
Polyketide sugar unit biosynthesis
sbae00541
Biosynthesis of various nucleotide sugars
sbae01100
Metabolic pathways
sbae01110
Biosynthesis of secondary metabolites
sbae01250
Biosynthesis of nucleotide sugars
Module
sbae_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSM104329_05043 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSM104329_05043 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSM104329_05043 (rfbC)
Enzymes [BR:
sbae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DSM104329_05043 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
UGS38613
UniProt:
A0A9E6Y2E2
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All DBs
Position
complement(5189682..5190227)
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AA seq
181 aa
AA seq
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MRRLDTRLDGPILLEPTIHGDARGFFVETFRRETFDEVGITTEFVQHNHSRSSRGVLRGM
HYQLGLAKHVRCARGRILDVVVDVRRTSPCFGQWEAFTLDDETHHQLFVPAGFAHGFVVL
SEIADVVYLQDDYYDPQRDRGISYRDPDIGIAWPDGLELQTSERDDNQPMLRDVPPEDLP
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcctcgacacccgcctcgacggaccgatcctgctcgagccgaccatccacggc
gacgcccgcgggttcttcgtggagaccttccgccgcgagacgttcgacgaggtcgggatc
acgaccgagttcgtccagcacaaccactcgcgctcgagccggggcgtgctgcgcggcatg
cactaccagctcggcctcgccaagcacgtgcgttgcgcgcgcggccgcatcctcgacgtc
gtcgtcgacgtgcgccgcacctcgccgtgcttcggccagtgggaggcgttcacgctcgac
gacgagacccaccaccagctcttcgtgccggccgggttcgcgcacggcttcgtcgtcctc
tcagagatcgccgacgtcgtctacctgcaggacgactactacgacccgcagcgcgaccgc
ggcatctcctaccgcgatccggacatcggcatcgcctggcccgacggcctcgagctgcag
acgtccgagcgcgacgacaaccagccgatgctgcgcgacgtgccgccggaggacctgccg
gagtag
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