Capillimicrobium parvum: DSM104329_05464
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Entry
DSM104329_05464 CDS
T08390
Symbol
sigA_3
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sbae
Capillimicrobium parvum
Pathway
sbae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSM104329_05464 (sigA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbae03021
]
DSM104329_05464 (sigA_3)
Transcription machinery [BR:
sbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM104329_05464 (sigA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Sigma70_r4_2
HTH_25
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UGS39032
UniProt:
A0A9E6Y2E4
LinkDB
All DBs
Position
complement(5652991..5653827)
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AA seq
278 aa
AA seq
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MLWSMYDHDEALTLYLEEIGRHKLLTADEEIELAKRIERGDLAAKERMMTANLRLVVSLA
KRYQDRGLTLFDLIQEGNVGLIRAVEKFDHRKGFKFSTYAVWWIRQSLARALADKGRTIR
LPVHIAERLHRVQRAERRFVLKHARDPSNEELAEELGLTLDEIEIVRGELPATVSLHAPV
GDDEAELGDFLEDRASPTPFDETAAVMDRHAIDSALENLPGGERRVIQMRFGLDGQPERT
MHQVARELKLSADRVRRLEEQALRKLRQLPEAQALNAA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgctctggtccatgtacgaccacgacgaggcattgacgctgtatctggaggagatcggg
cgccacaagctgctgaccgcggacgaggagatcgagctcgccaagcgcatcgagcgcggt
gacctcgcggccaaggagcggatgatgacggcgaaccttcgcctcgtcgtctcgctggcc
aagcgctaccaggaccgcgggctgacgctgttcgacctcatccaggaaggcaatgtcggc
ctcatccgcgcggtcgagaagttcgaccaccgcaagggcttcaagttcagcacctacgcg
gtctggtggatccggcagtccctggcgcgcgcgctggccgacaagggccggacgatccgg
ctgcccgtgcacatcgcggagcgactgcaccgcgtgcagcgcgccgagcggcgattcgtg
ctcaagcacgcccgcgatccgagcaacgaggagctggccgaggagctcggcctgacgctc
gacgagatcgagatcgtgcgtggcgagctgccggccaccgtctccctgcacgcgcccgtc
ggcgacgacgaggccgagttgggcgacttcctcgaggaccgcgccagcccgacccccttc
gacgagaccgccgccgtcatggaccgtcacgcgatcgactccgccctggagaacctcccg
ggcggcgagcggcgcgtgatccagatgcggttcgggctcgatggccagcctgagcggacg
atgcaccaggtcgcgcgggagctcaagctctccgccgaccgggtgcgcaggctcgaggag
caggcgctgcgcaagctccgccagctgcccgaggcccaggcgctcaacgcggcgtag
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