Capillimicrobium parvum: DSM104329_05476
Help
Entry
DSM104329_05476 CDS
T08390
Symbol
rffG_3
Name
(GenBank) dTDP-glucose 4,6-dehydratase 2
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sbae
Capillimicrobium parvum
Pathway
sbae00521
Streptomycin biosynthesis
sbae00523
Polyketide sugar unit biosynthesis
sbae00525
Acarbose and validamycin biosynthesis
sbae00541
Biosynthesis of various nucleotide sugars
sbae01055
Biosynthesis of vancomycin group antibiotics
sbae01100
Metabolic pathways
sbae01110
Biosynthesis of secondary metabolites
sbae01250
Biosynthesis of nucleotide sugars
Module
sbae_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sbae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSM104329_05476 (rffG_3)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSM104329_05476 (rffG_3)
01055 Biosynthesis of vancomycin group antibiotics
DSM104329_05476 (rffG_3)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSM104329_05476 (rffG_3)
00525 Acarbose and validamycin biosynthesis
DSM104329_05476 (rffG_3)
Enzymes [BR:
sbae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DSM104329_05476 (rffG_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
adh_short
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UGS39044
UniProt:
A0A9E7C6J9
LinkDB
All DBs
Position
5663774..5664769
Genome browser
AA seq
331 aa
AA seq
DB search
MRLLVCGGAGFIGSNFVRLRVRDEGDEVVVLDKLTYAGRRENLQDLPDVELVVGAIEDGD
AVDRAIGDGVDAIVNFAAETHVDRSISEPDAFVKTNGQGTYELLEAARRHQVSRYVQIST
DEVYGSIEEGSFTEESPIQPSSPYSASKAGADLLVSSYFHTYGLETLICRGSNNYGPWQY
PEKLIPLMVLNAMHGDPLPVYGDGMQVRNWLYVEDFGRGIGHVLAHGRPGEAYNVGGPDE
CPNIEVVNRIVEQTGADPSIIEYVTDRPGHDRRYSLGSEKVRALGWEAQVRFEEGLRRTV
LWYRDNAWWWEPIRSGDYREYYERQYGRKLG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagactgctcgtatgtggaggggccggcttcatcggctcgaacttcgtccggctgcgg
gtgcgcgacgagggcgacgaggtcgtcgtcctcgacaagctcacgtacgccgggcggcgc
gagaacctgcaggacctgcccgacgtcgagctcgtcgtcggcgcgatcgaggacggcgac
gccgtcgaccgggcgatcggcgacggcgtggacgcgatcgtgaacttcgcggccgagacc
cacgtcgaccgctcgatctccgagcccgacgcgttcgtcaagaccaacggccagggcacg
tacgagctgctggaggccgcgcgccgccatcaggtctcccgctacgtgcagatctcgacc
gacgaggtctacggctcgatcgaggagggctccttcaccgaggagtcgccgatccagccg
tcgagcccgtacagcgcgagcaaggccggcgccgacctgctcgtctccagctacttccac
acgtacggcctcgagacgctgatctgccggggctcgaacaactacgggccgtggcagtac
ccggagaagctcatccccctgatggtcctgaacgccatgcacggcgaccccctgccggtc
tacggcgacggcatgcaggtgcgcaactggctctacgtcgaggacttcggccgcggcatc
ggccacgtgctcgcgcacggccggcccggcgaggcctacaacgtcggcggcccggacgag
tgcccgaacatcgaggtcgtcaaccgcatcgtcgagcagacgggcgcggacccctcgatc
atcgagtacgtcaccgaccggcccggccacgaccgccgctacagcctcggctccgagaag
gtccgggcgctgggctgggaggcgcaggtgcgcttcgaggagggcctgcggcggaccgtg
ctgtggtaccgcgacaacgcctggtggtgggagccgatccgctccggcgactaccgcgag
tactacgagcgccagtacgggcgcaagctgggctga
DBGET
integrated database retrieval system