Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0053
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Entry
UW38_C0001G0053 CDS
T04605
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03420
Nucleotide excision repair
sbag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UW38_C0001G0053 (uvrD)
03430 Mismatch repair
UW38_C0001G0053 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbag03400
]
UW38_C0001G0053 (uvrD)
Enzymes [BR:
sbag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UW38_C0001G0053 (uvrD)
DNA repair and recombination proteins [BR:
sbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UW38_C0001G0053 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
UW38_C0001G0053 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Dna2
DEAD
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
AKM79923
UniProt:
A0A0G4AXK9
LinkDB
All DBs
Position
complement(41398..44694)
Genome browser
AA seq
1098 aa
AA seq
DB search
MDFDTRYKKLNAQQKQAVDTIDGPVMVVAGPGTGKTELLSMRAANILKRTDVLPENILCL
TFTESGASAMRERLVSIIGKDAYKVAIHTFHSFGTEIINQHGQYFYHGANFRPADELSSY
EIIRGIFDELEYTSPLAKKMNGEYTYLSDTLRTISELKRSGLTSDELTAVLDANDAVIDK
IESQLAEVFAARISKSTPGQLAPILEHIRTIDETTELVTIVPLQRIIAESLEQALEVAAD
TGKTTSVTAWKNTWLKKNEHGDFVFKSRERQVKLRALSAVYYQYLARMQEAELYDFDDMI
LRVVHAMEVFDDLRFNLQEKLQYIMVDEFQDTNMAQMRILHNLTDNPANEGKPNILVVGD
DDQAIYSFQGAEIGNIINFRELYSTTKLITLVDNYRSAPTILSHARQVITQGSDRLENHI
PELDKNLTAHKPDDRSTVELIELENTGDEREWLARSIKEQLDDGVNASDIAVLARRHHEI
TALLPYLAHAGINVNYERRDNVLDLEIITHIELVSQLIIAIFESRYKDADALLPQLLAHP
AWSIDPVAVWRLGLNAKQNHQSWIEVMAVTPSFVPLHNWLLASSQALSHLPLELMLDVII
GSEQPEPGSEDEGTFISPIFEYFFSAKNLAEQPDQYLIYLEALRTIRTKLREYRPNETPK
LQSFIEFIRLNRQLGSTIESVRRRSAKLDNAVNLMTAHKSKGLEFDTVYVIGAVDNAWGE
RVATRSSMIGYPENLPLAVSGGSFDERLRLFFVAMTRAKRQLLISYSSANDSGKDTLRAS
FLADDLWQPTAPEFNHTIETLVQSATQQWYEPLVSLSSQSLRELLAPTLEHYKLSATDLS
AFLDVSRGGPQMFLLQNMLRFPRGSSPASSYGTAFHATLQRAHAHLSATGKHRAPEDILH
DFEQNLIAEHLSDGDFKLYLQKGSDSLQAFLGKKYVDFTTDQKAEVRFNGEHAIIGEAHL
SGAIDLLTIDKDTKTIIVTDYKTGHATRDWKGKTEYDHIKLHKYRQQLMFYKLMVEHSRT
YSDYQVERGVLQFVEPTMTGEILALESHFDREELATFTQLIQKVWQKITTLDLPDASQYG
QSYKGILAFEQALLDDEV
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatactcgctacaaaaaactgaacgctcagcaaaaacaagccgtagataca
atcgacggcccggtcatggttgtcgctggcccgggtacgggtaagactgagcttctgagt
atgcgagcagcaaacatacttaaaagaacagacgtcctcccggaaaacatcctatgtctc
acatttaccgaaagtggggcaagcgctatgcgcgaacgtctcgtcagtatcatcggaaaa
gacgcctacaaggtcgcgattcatacatttcacagttttggcaccgagattataaaccag
cacggccagtatttctatcatggagcaaactttcgacctgccgacgagctaagcagctat
gagattatccgcggtatatttgacgagcttgaatatacgagtccactggcaaaaaagatg
aacggtgaatacacgtatctctccgatacgcttcgcacaatcagtgaactcaagcgaagc
ggtctcacgagcgatgaactgacagccgtacttgacgccaacgatgccgtcatagacaag
attgagtcgcaactcgccgaggtattcgctgcacgaatcagcaaatcaacgcctggccag
cttgcgccgatccttgagcatatccgtaccattgacgagactaccgaactcgtcacaatc
gtgcccctgcaacgtatcattgccgaaagcctcgagcaggcacttgaggtcgctgcagat
acaggcaaaacaacatctgtcaccgcatggaaaaatacgtggctcaaaaaaaatgaacac
ggagacttcgtctttaagtcgcgcgaacgtcaggtaaagctacgggcactcagcgcagtt
tattaccaataccttgctcgcatgcaagaggctgaactatacgactttgacgatatgatc
ctacgagttgttcatgcgatggaagtgttcgatgatcttcgcttcaacctacaggaaaag
ctgcaatacatcatggttgatgagttccaagacaccaacatggcgcaaatgcgaatcttg
cataacttaactgacaatccagcaaacgaaggtaaaccgaatatacttgtagtcggtgat
gatgatcaagcaatctacagtttccaaggtgcagaaatcggcaatatcatcaacttccgt
gagctctacagtacaacaaaacttattacgctcgtcgataattatcgaagcgcacccacc
atcctctctcatgctcgacaagtgatcacacaaggctcggaccgtctcgaaaaccacatc
ccggaactagacaaaaacctcacagcccataagcctgatgatcgaagtaccgtggaactt
attgagcttgagaatactggcgacgaaagagagtggctcgctcgctccataaaagagcag
ctcgatgacggcgtcaacgcaagtgatatcgcagtactcgcaagaagacatcacgaaatc
accgcactacttccataccttgcgcatgctgggattaatgttaactatgagcgccgcgac
aacgtgcttgatctcgagattatcacacacatagaactcgtaagccagctgattattgcg
atctttgaatcgcgctacaaagatgccgatgcgctactaccgcaactcctcgcacaccct
gcatggtcgatcgaccctgttgccgtatggagacttggcctcaacgcaaaacaaaaccat
cagagctggatagaagttatggcagtaactccgagctttgttccactacataactggcta
ctcgcttcgtcgcaagcgctctctcatttaccactcgagctcatgcttgatgtcatcata
gggtcggaacaacccgaaccaggcagtgaagatgaaggtacgtttatatcaccaatcttt
gaatactttttcagcgctaaaaaccttgccgagcagcctgatcagtatcttatctatctt
gaggcacttcgcacaatccgcaccaagctacgcgaataccgaccaaacgaaacgccaaaa
cttcaaagcttcatcgagtttatccgactcaaccgacaacttggatcgacgattgaaagc
gtacgaaggagaagtgctaagctcgacaatgccgtcaatctcatgaccgcacataaatca
aagggactcgaatttgacactgtctatgtaatcggtgctgtcgataacgcctggggcgag
cgcgtcgcaacacggagtagcatgattggctacccagaaaaccttccacttgctgttagc
gggggaagttttgacgaacgcctacgactattttttgtcgctatgacgcgcgccaagcga
cagctactcatcagttacagtagcgccaacgatagcggcaaagacacacttagagcaagc
ttcttagctgacgatctatggcaacctacagcgccagaattcaaccacacgatcgaaaca
cttgttcagtccgccacgcaacaatggtacgagccactcgtcagcctatcgagccagtct
ctacgcgagctactcgcaccaactcttgaacattacaaactcagcgcgactgaccttagt
gcatttctcgatgtcagtcgcggtggcccgcagatgtttctgctgcaaaatatgctacgc
tttccgcgcggctctagcccagcatcatcgtatggcacagcatttcacgcgaccctgcag
cgtgcacacgcccatctaagtgcgaccggaaaacatcgcgcgcctgaagacatactgcat
gactttgaacaaaacctcatcgcagaacatctctctgacggcgatttcaaactatatcta
caaaagggcagcgacagcctacaggcgtttctggggaaaaaatatgtcgacttcaccact
gatcaaaaagccgaagtgcggtttaatggtgaacatgcaatcatcggagaagcgcacctc
agtggcgcgatcgacctacttactatcgataaagacactaaaaccatcatcgtcactgat
tacaaaaccggacacgccacccgagactggaagggtaagaccgaatatgaccacattaaa
cttcataagtatcggcaacagttaatgttttataagctcatggtcgagcactctcgcacc
tatagtgattaccaagtcgagaggggtgtattgcagtttgtcgagccaacaatgaccgga
gagatccttgcacttgagtcacattttgatcgtgaagaactcgcaactttcacgcaactt
atccaaaaagtctggcaaaaaatcacaactctcgatctaccagatgcaagtcagtatggt
cagtcttataaaggaatcttggcctttgagcaagcactccttgacgacgaagtttaa
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