Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0269
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Entry
UW38_C0001G0269 CDS
T04605
Symbol
dnaE
Name
(GenBank) polymerase III alpha subunit protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03030
DNA replication
sbag03430
Mismatch repair
sbag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UW38_C0001G0269 (dnaE)
03430 Mismatch repair
UW38_C0001G0269 (dnaE)
03440 Homologous recombination
UW38_C0001G0269 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbag03032
]
UW38_C0001G0269 (dnaE)
03400 DNA repair and recombination proteins [BR:
sbag03400
]
UW38_C0001G0269 (dnaE)
Enzymes [BR:
sbag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UW38_C0001G0269 (dnaE)
DNA replication proteins [BR:
sbag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UW38_C0001G0269 (dnaE)
DNA repair and recombination proteins [BR:
sbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UW38_C0001G0269 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HROB
DUF655
EF-1_beta_acid
Motif
Other DBs
NCBI-ProteinID:
AKM80132
UniProt:
A0A0G4AZH9
LinkDB
All DBs
Position
complement(229452..233186)
Genome browser
AA seq
1244 aa
AA seq
DB search
MGVETATVVAKKTQLTPADYVHLHNHTHHSLLDGLTKIPDLVNAVKDMGMEAVAVTDHGT
MSGAVDFYKSAKDAGVKPIIGMEAYVAARSRHDRDPAKDKARYHLILLAMNETGYKNLMK
LSTTANLEGIYYKPRIDHELLEELNEGIIALSACASGEVGEALRNGDYEKARDTAAWYKS
IFGDRYYLELQDHGHPDCPAKWDVQVEVNKGLDKISAELDIPCVVTSDGHYLSHDDQDAH
EILLCVGTGAFLADEKRMSLKDFELHVTDPADIISRWSDTNPEAIANTKRIAERCNVELE
LGGILIPTFPVPEGETEKTFLDKLVYRGMAMRYGGIEPEDAKKMEVEAVKPLLNEEQTER
LEMELGVLDKMGYNAYFLIVQDFINWGKDQGIIFGPGRGSAAGSIIAYALKITDLDPLKY
GLLFERFLNPDRISMPDIDVDIQDTRRDEVIQYCSDKYGADHVSNIVTFGKMAARAAVRD
VARVLQVPYAEADRLSKMIPPPAQGRHIPLKTSIVEDVDLKKEYDSNPTAKTVFDFAVRL
EGTIRSHGVHACGVVIAPDVLVKYLPLEMAQKGVVSTQFPMGEVEELGLLKMDFLGLSNL
TIINNALRIIKKVYKDEIDLSKIPLDDVKTYELFQRGDTTGVFQLESAGMKRYLRELKPT
VFEDIIAMVALYRPGPMQFIDSFIKRKHGQEPIEYLHPGMENSLSSTYGILVYQEQFMQI
SKEWSGFTGGQADTLRKAVGKKKIDLMRKVKVDFVDGAVKHSGAKKEIAEKFWDQLEEFA
NYCFNKSHAACYGLISYWTAYLKAHYPDAFMAALMTSDQDDIDRLAIEISECKHMGMKVL
SPDVNESFVEFAIVPNENQIRFGMAAIKGVGVGAVEEILRARNDGPFVSVEDFAKRVSTS
KVNKKGWESLIKAGAFDVLGDRSDLLYNLENLLAFSSKLHKEALSGQTDLFGGLSGNENI
QPTVAMQPAPAKHTEKERLTWERELLGLYISAHPLDHYDAFFEEQTIPLTRITPDFDSKK
AIIGGLVSTVRTIITKSGTKMAFVGLEDKTGEGEVIVFPNLYEQVGAKLVQDAVVRVSGK
ISARDREGNLGSEAKLIADEINEITDKELREYESTGRKMEAPRMSTQVKAQRVAEYKSKK
TGIPMPVAAKKTEEEPKKAAAAPRPILEIPQPKKIFVHIKDPDDHAALLALKQTCSSFPG
ASDIVLVLGAEKKSAIRLPFTVDNSELLIGELVKLLGEDCVAQK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagaaacagcaacagttgtggcgaaaaaaacgcaacttacaccggctgattat
gtgcacttacataatcacacacaccacagcctgttggacgggttaacaaagatacccgat
ctcgtaaatgctgtcaaagatatgggcatggaggcggttgccgtgacagatcacgggaca
atgtctggcgcggtagatttttataagtcagccaaggacgctggcgtgaagccgattatc
ggtatggaggcgtatgtcgctgcgcgcagtcgtcatgatcgcgatccagccaaggataag
gctcgctatcatcttattctcctcgcgatgaacgagacagggtataagaacctcatgaaa
ttatctacaactgcaaacctcgaaggtatctattacaagccacgtattgatcatgagctg
cttgaagagcttaacgaaggtattattgccctctcggcatgtgcaagtggtgaagtgggt
gaggcgcttaggaatggggattatgaaaaagcgcgcgatactgcggcctggtacaaatca
atttttggtgatcggtattatctggagcttcaggatcatggtcatccagattgtcctgct
aagtgggatgttcaggtggaggttaataaaggcctagataagatatctgctgaacttgac
ataccctgtgttgttacgagtgatggccactatctcagccatgacgatcaagacgcgcat
gagatccttctttgtgtgggaaccggagcattcctggcagacgaaaagagaatgagtctg
aaggactttgagcttcatgtaactgatcctgcggatatcattagtcgatggagcgataca
aacccagaggcgatcgcaaacacaaagcgtattgctgagcgctgtaatgttgagcttgag
ctcgggggtatccttattccgaccttccctgttcctgagggcgagacggagaaaacattc
ctcgataagttggtgtaccgaggaatggcaatgcgctacggagggattgaacctgaagac
gcaaaaaaaatggaagttgaggcagttaagccacttctaaacgaagagcagaccgagcga
cttgaaatggagctaggagtgctcgataagatggggtacaatgcctatttcttgatcgtc
caggacttcattaactggggcaaagaccaaggaattatttttggccctggtcgtggctct
gctgccggctctatcattgcctatgcactcaaaattacagatctcgatccattgaagtac
ggactgctgtttgagcgtttccttaatcctgatcgtatttccatgccggatatcgatgtt
gatattcaggatacgcgccgtgatgaggtgattcagtattgttcagataagtatggcgcc
gaccacgtatcaaatattgtgacttttggtaaaatggcagctcgagcagccgtacgtgat
gtcgctcgtgtgctacaggtgccgtatgcagaggcagatcgcctgtcaaagatgattccg
cctcctgcgcaaggacgtcatattcctctcaagacgtctattgttgaagacgttgatctc
aaaaaagagtacgactcaaatccgacagcgaaaacagtttttgattttgccgtccgtctc
gaaggaacaattcgaagtcatggtgttcatgcctgtggagtagtgatcgcacctgatgta
cttgtgaaatatttgccactcgaaatggcacaaaaaggggtggtttcaacccaatttcca
atgggtgaggtagaggaacttggtctgcttaagatggactttttgggactctcaaacctg
acaattatcaacaacgcactccgtattatcaagaaggtgtataaagatgagattgatctt
tcgaagattcctctcgatgacgtgaagacgtatgaactgttccagcgtggagatacaact
ggagtattccagcttgagtctgccggtatgaagcgctatctgcgcgagctaaaaccgaca
gtatttgaagatattattgcgatggttgctttgtaccgaccaggtcctatgcagtttatc
gatagctttattaagcgtaaacatggacaagagcccattgaatacctccaccccggtatg
gagaattcgctatctagtacatacggtattcttgtatatcaagagcagtttatgcagatc
tccaaagagtggtcaggatttacaggtggtcaagcggacacacttcgtaaggctgtaggc
aagaagaagattgatcttatgcgtaaagtgaaggttgattttgtcgatggcgcggttaag
catagcggtgcaaaaaaagagatcgctgaaaaattctgggatcagctcgaagagtttgcg
aattactgtttcaataaatctcacgcagcgtgctacggcctcatctcttattggacggca
tacctaaaggcacattacccagatgcatttatggcagcattgatgacgagtgatcaggat
gatattgatcgtttggcgattgaaatttccgagtgtaagcatatgggtatgaaagtcctt
tcacctgatgtaaatgaatcattcgttgaatttgcgattgtgccaaatgaaaaccaaatt
cgattcggtatggcggcgatcaaaggtgttggtgtgggggcggtagaagagattcttcgc
gcacgaaatgacggtccgtttgtgagcgtagaagattttgccaagcgcgttagtacgagc
aaggtgaataaaaagggctgggagtcgctcattaaggcgggggctttcgatgtacttggt
gatcgttccgacttactctataatctcgagaatcttttggcgttttcaagcaaactccac
aaagaggccctgagcggtcaaactgatctattcggtggcttgtcgggtaatgagaatatc
cagccgacagtagctatgcagccggctccagctaagcatacggagaaagagcgccttacg
tgggaacgcgagctgctcggactgtatattagcgcccacccacttgaccattatgatgct
ttctttgaggagcagactattccgctgacacgcattacaccagattttgatagcaagaag
gcgattatcggtggtcttgttagtactgttcgaacgatcattacaaaatccggaacgaaa
atggcattcgtagggcttgaagataaaacaggagagggcgaggtcatcgtttttccgaat
ctctatgagcaagtcggagcaaaacttgtacaagatgcagttgttcgtgtaagtggtaag
attagcgctcgtgaccgtgagggaaacctcggcagtgaggcgaagcttatcgccgatgag
atcaatgagattacggataaggagctgcgcgagtacgaatctacgggacggaagatggag
gcgcctcgaatgagcacccaggtaaaagcgcagcgtgttgctgaatacaaatcaaagaag
acgggcattccaatgcctgttgcagcgaaaaagactgaagaagagccaaagaaagcagct
gcagcgcctcgacctatcctagagattcctcagccaaagaagatatttgtgcatattaaa
gatcctgacgaccacgcagcacttttagcgctgaagcagacatgtagtagttttccagga
gcatccgatattgtattagtgcttggcgcagagaagaaatcggcaattagacttccattt
accgttgataatagcgagttgctgataggcgagctagtgaagcttcttggcgaagactgt
gttgctcaaaaatag
DBGET
integrated database retrieval system
