Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0426
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Entry
UW38_C0001G0426 CDS
T04605
Symbol
uvrA
Name
(GenBank) excinuclease ABC (subunit A)
KO
K03701
excinuclease ABC subunit A
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UW38_C0001G0426 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbag03400
]
UW38_C0001G0426 (uvrA)
DNA repair and recombination proteins [BR:
sbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UW38_C0001G0426 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UW38_C0001G0426 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_22
AAA_33
Viral_helicase1
DnaJ_CXXCXGXG
nSTAND3
ATPase_2
cobW
Motif
Other DBs
NCBI-ProteinID:
AKM80282
LinkDB
All DBs
Position
complement(367023..369839)
Genome browser
AA seq
938 aa
AA seq
DB search
MPEVIRVTGAREHNLKNINVEIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGTMDKPDVDQIDGLSPAISIDQKSTSRNPRSTVATVTEIYDYLRLLFARIGVPH
CPIDGEPVQRRTPQDIIDEILKYEDGKRLMLLAPIVKSKKGEHAHIPEQYRRLGFARARV
DGVVYALDEFPDLQKNFKHDIEIVVDRIAMSSDMNSRVAQSVEQALDLGGGIVEILDVDD
DSTRIFSQRYACVNHPEEEIPELEPRLFSFNAPQGACPVCTGLGSRLEVDPSLVFNASLT
ISEGAIRPYNRVNSDAWYMRRLAAVADAHEFSLQVPVSELSEEDLEKVLYGTGAQTYRIN
LGSGRSYDSTYEGVIPNLERRHKETDSEFMRKDIERFMRDRKCYTCKGARLKPVVLAITV
HGLNIMDICNLGVDDALDLFHNNLKLSDQEQVIAAQIMKEINARLGFMSNVGLNYLELGR
AANTLSGGEAQRIRLATQIGSGLQGVLYVLDEPSIGLHQRDNDRLIGTLKRLRDLGNTVL
VVEHDEDTIREADYLLDIGPGAGVAGGNVVAAGTPAEVAKNKDSVTGRYLAGTEKIAVPK
KRRTIEKDRKLVVKGARENNLKNINVEVPLGVITVVSGVSGSGKSTLVNDILAKELSARL
HRSQAVPGTHDNIEGIEQLDKAIVIDQSAIGRTPRSNPATYTGVFTPIRELFAGTPESNI
RGYKAGRFSFNVKGGRCENCQGDGVIKIEMHFLPDVYVTCDVCNGKRYNREALEIKYKEK
TISDVLEMTVEQSAKFFENVPTIARKLDTLVEVGLGYIRLGQPATTFSGGEAQRIKLASE
LSRRSTGKTMYILDEPTTGLHSADVNRLIQILQRLVEGGNSMVIIEHNLDVIKTADHVID
MGPEGGLGGGMVVAAGTPEQVSNVKGSFTGKYLAPLLK
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggttatacgagttactggtgctagagagcacaatctaaaaaatattaacgtg
gaaataccacgtgataagcttgtcgtgatcactgggcttagtggctctggtaagtcgagc
ttggcgttcgataccatctatgctgaggggcagcgacgatacgtagagagtctgtcgagt
tacgcgcgacagttcctcggtactatggacaagcccgatgtcgatcagatcgatggcctc
agccctgctatatctattgatcaaaaatctacgagtcgaaatccacgttcaaccgtagcg
acggtcacggaaatttatgactaccttcgtcttctttttgcgcgaatcggtgtgccgcac
tgtccaatcgatggtgagcctgtgcagcgacgaacgccacaagatattatcgatgaaatc
ctaaaatacgaagacggcaagcgattaatgcttcttgcgccgatcgtaaagagtaaaaaa
ggcgaacacgcgcatattcctgagcagtatcgtcggctaggatttgctcgtgcacgagtt
gatggcgttgtgtatgcgcttgatgagtttcctgatcttcagaaaaactttaaacacgat
atagagatcgttgtagatcgtatcgctatgagcagtgatatgaatagtcgtgttgcccag
tcggttgagcaggcgcttgatcttggtggagggatcgtcgagattctggatgttgacgat
gattcgacgcgtatcttttctcagcgttatgcctgcgtgaatcaccccgaagaagagatt
ccggagctggagcctcgtctgtttagctttaacgcgccacaaggtgcatgccccgtatgt
actggactcggcagtcgacttgaagttgatccaagtcttgtcttcaatgcgagccttacg
attagcgaaggagcgatccgtccgtacaatcgcgttaatagtgacgcatggtatatgaga
cgacttgctgcggttgctgatgcgcatgagtttagtttgcaggtgccagtgagcgagtta
agtgaagaggatcttgaaaaggtgctgtatggtactggtgctcaaacatatcgtatcaat
cttggtagcggccgtagttacgactcgacatatgaaggtgtgatcccaaaccttgagcga
cgccataaagaaacagatagtgaatttatgcgaaaagatatcgagcgatttatgcgcgat
cggaagtgttatacctgtaagggcgctcgactaaagccagtagtgcttgcaatcacggtt
catgggctaaatattatggatatttgtaatttaggtgttgatgatgcgcttgatcttttc
cataacaacttgaagctcagtgaccaggagcaggtaattgctgcacagatcatgaaagag
attaatgctcgccttgggtttatgagtaacgtggggctgaattatcttgagctaggccgt
gctgcaaatacactgtctggtggtgaagcgcagcgtattcgtctcgcgacacagatcggt
tctggactccagggcgtgctgtacgtgctcgatgagccgtcaattggactacaccagcga
gacaacgatcgtctcatagggacgttgaaacgtctgcgtgatcttggtaatactgtgctt
gtcgttgaacatgacgaagataccattcgagaagccgactatctacttgatattgggcct
ggcgcgggtgttgcaggtggcaatgtagtcgctgcgggcactcctgcggaagttgccaaa
aacaaagacagcgttacagggcgttaccttgcaggaactgaaaagattgccgtacctaag
aagcgtcgtacgattgaaaaagatcgcaagctcgtcgttaagggtgcacgagaaaataat
ctcaagaatattaacgtagaggtgccgcttggcgttattactgtcgtgagtggtgtctct
gggtctggtaaatctacgctcgttaacgatatccttgcaaaagagttatcggcgagactt
catcgatcgcaggcggttccaggtactcatgataatatcgaaggaattgagcagcttgat
aaagcgatcgtgattgatcaatcagcaatcggacgaactccacgaagcaatccagctacg
tatactggtgtgtttacgccaatccgcgaactatttgctggtacaccagaatcaaatatt
cgcggctataaggcgggacgatttagttttaatgtcaagggtggtcgctgtgagaattgt
cagggcgatggagtgattaagatcgaaatgcactttcttccggatgtgtatgttacttgt
gatgtctgtaacggtaagcgatataaccgagaggcgcttgagattaagtacaaagagaag
acaatcagcgacgtacttgagatgactgtagagcaatctgcgaagttctttgagaatgtg
ccaactatcgctcggaagcttgacactcttgtcgaggtgggccttgggtatattcgtctc
gggcagccggcaacgacatttagtggtggtgaagcgcagcgtattaaacttgcaagtgag
ctttctcgtcgtagtacgggtaaaacgatgtatattcttgatgagccaacgacaggactg
catagtgctgacgtgaatcgtttgattcagatcctgcagcgtcttgttgagggtggcaac
agtatggtgattattgaacataacctagacgttattaagacagcagatcatgtgattgat
atgggcccagaaggtggacttggcgggggtatggtagttgctgcaggtactcctgagcag
gtgtctaacgtgaagggatcttttacaggaaagtatttagcaccgctactaaagtag
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