Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0428
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Entry
UW38_C0001G0428 CDS
T04605
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UW38_C0001G0428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbag03400
]
UW38_C0001G0428
Enzymes [BR:
sbag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
UW38_C0001G0428
DNA repair and recombination proteins [BR:
sbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
UW38_C0001G0428
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UW38_C0001G0428
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UW38_C0001G0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
NICE-3
Coa1
Activator_LAG-3
Motif
Other DBs
NCBI-ProteinID:
AKM80284
UniProt:
A0A0G4AXE7
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All DBs
Position
complement(370312..371751)
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AA seq
479 aa
AA seq
DB search
MAQTFFFYDLETSGLSARDARIMQFAGIRTDMELNPIGEPYDVLVALNDDTLPSPEALMV
TGITPQQTVADGYTEAQFAELLTSEIFTENTIAVGFNSIRFDDEFVRHLFWRTFRDPYEW
SWRDGRSRWDLLDVVRMTRALRPEGIVWPVTEDGKATNRLELLTAQNGIDHLKAHDALSD
VEALIAVTNLIKQKQPQLYSYLLKMRDKNEVKKLVNVDDKKPFVYTSGRYDNEHDKTTIA
FPLTPGKNGNVVVYDLRYDPSPLLNLSQDELAKKMSASWDERQSEGFVKLPVKELQYNRA
PAVAPVGVLEQADGWKRIHLDMETIEKHKAALLSAPHFAENIRSLIEKRPEFKKSKDVEA
QLYDGFLNDRDRLRVETVRNATERELADFQPEFSDERLGQLLVHYKARNFPKTLTDSEQH
EWERWRIAHIHDQLPEFMKSLGRLSATEKDENKQFILQELQLWLESIAPTDLSSQDVDA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaacattctttttttacgaccttgaaacgagcggactcagtgcgcgtgatgca
cgaattatgcaattcgctggaatccgcactgatatggagctcaatcctatcggcgagccc
tacgatgtactcgttgctttaaatgatgatacactcccaagtccggaagcgctgatggtg
acagggattacgccgcagcagacagtagcagacgggtataccgaggcgcagtttgccgag
cttctgacaagtgagatattcactgaaaatactattgccgttgggtttaatagtattcgg
tttgacgacgaatttgtacgccaccttttttggcgaacgtttagggacccatatgagtgg
tcgtggcgagatggacgctccagatgggatttacttgatgttgtgcgcatgacgcgggca
cttcgaccagaggggattgtctggcctgtcactgaggacggcaaggcgacgaatcgccta
gagcttctcactgcgcaaaatggtatcgaccacctaaaagcgcacgatgccctgagtgat
gttgaagcgctgattgcggtgacgaatctgattaagcaaaaacagccgcagctctatagc
tatcttctgaagatgcgtgacaaaaacgaagtaaagaagctggtgaatgtagacgacaaa
aagccgtttgtctatacgagtggacggtatgataacgagcatgacaaaaccaccattgca
ttcccgttgaccccggggaagaatggcaatgttgtcgtgtatgatcttcgttacgaccct
tcgccgctccttaacctttcgcaggatgaactggcaaagaaaatgtccgcctcgtgggac
gagcgtcaatctgaaggcttcgtaaaacttccagtaaaggaattgcagtataatcgtgca
ccagcggttgcacccgtgggcgtactggagcaggctgacggatggaagcggattcaccta
gacatggagactatcgagaagcacaaggctgcactcttgagcgcacctcatttcgcagaa
aatatccgtagtcttatcgaaaagcgtcctgaatttaaaaaatctaaagatgttgaggcg
cagctatacgatgggttcttgaatgatcgagatcgactccgagtagagacagtgcgcaat
gctactgagcgagaacttgctgattttcagccggaatttagcgacgaacggctcggacag
ctactcgtacactataaggcgcgtaactttccaaagacgctgacggatagcgagcaacat
gagtgggaacgctggcgaattgctcatattcatgaccagctaccggaatttatgaagtca
cttggtcgcttgtcggcaacggaaaaagatgaaaataagcagtttattttgcaagaattg
cagctgtggctagagagtatcgcgccaactgacctttcgagtcaagacgtcgacgcgtaa
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