Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0453
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Entry
UW38_C0001G0453 CDS
T04605
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03420
Nucleotide excision repair
sbag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UW38_C0001G0453 (pcrA)
03430 Mismatch repair
UW38_C0001G0453 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbag03400
]
UW38_C0001G0453 (pcrA)
Enzymes [BR:
sbag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UW38_C0001G0453 (pcrA)
DNA repair and recombination proteins [BR:
sbag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UW38_C0001G0453 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
UW38_C0001G0453 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKM80309
UniProt:
A0A0G4AXH3
LinkDB
All DBs
Position
complement(396244..398349)
Genome browser
AA seq
701 aa
AA seq
DB search
MDQLQGLNPAQSSAVTTTSGPLLILAGAGSGKTKTLTHRIAYLVQQQAVWPNEILAVTFT
NKAAKEMRERLGHLLGKDAQSRHFMPWMGTFHGICVRLLRIDGQSIGIAANFVIYDEDDR
QGLIKQAMKQLSISDKQIKARAVSSAISNAKNELRTPEDMMLSAKYPFEQSVADIYARYE
KLRSDAGALDFDDLLIETVRLFNEKPEVKKKWRDTFKHILIDEYQDTNAAQYAIVKSLVN
EERNICVVGDDWQSIYSWRGADFTNILNFERDFPGTKVIKLEQNYRSTGAILEAANNVIA
KNIQRTDKKLWTDLGDGSPVQVQGTYDEAEEASLVAGRIASHVSMGARTYGDFAVLYRTN
AQSYTLERALRLQRVPYQLVGGVRFYDRKEIRDIIAYLRLIYQPNDRMSFSRIANIPGRG
IGATSLEKFLVWQSGSQMDIIAALTNADQTTSLTPRARIAFKEFGEKMRILQAMVKSNAT
PADIIEKLLALTNYRSYLLDGTPQAEEREANVGALISEVQVFVDLPEFLEEVALVSSADT
SAGSDKVTLMTIHAAKGLEFPVVFMVGMEEGIFPHSRVYESGPSELEEERRLCYVGMTRA
REELHLSYAQSRLQFGQRGYNDVSRFIADMGDQLAAIDEPIVHAEPDYYSDELSLEIGDR
VRTAAFGKGEVVDIEGLAVTITFDDGITKKLNAEYAHLEKL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactacaaggtttaaatcccgcccaaagttcggcggttacaacaacgtctggg
cctttgcttatcttagctggagcaggaagcggcaagacaaaaacactgacgcatcgtatc
gcctacctcgtgcagcagcaggcggtgtggccaaacgaaatcttagcagtgacatttacg
aataaggctgcaaaagagatgcgagaacgcctgggtcatcttcttggtaaagatgcgcag
tcacgtcattttatgccatggatggggacatttcacggcatatgcgtccgtcttcttcga
atcgatggccagtcgataggtatcgcggcaaactttgttatatatgacgaagatgatcgt
caaggattgatcaagcaggctatgaagcagctttcaatcagtgataagcagatcaaggca
agggccgtgagtagcgcgatttcaaatgcaaaaaatgagctaagaacgccagaagacatg
atgcttagtgcgaaatatccatttgagcaaagtgtcgcagatatctatgctcgatatgaa
aagctgcggagcgatgcaggggcgcttgattttgacgacttactgattgaaacggtgcgt
ttatttaatgaaaaacctgaagtaaagaaaaagtggcgcgatacgttcaagcatatttta
attgacgagtatcaggatacaaatgctgctcagtacgctattgtaaaaagcctcgtcaat
gaagagcgtaatatttgtgttgtgggggatgactggcagtcgatctatagttggcgtggt
gctgactttacgaacatcctaaactttgagcgggactttcctggcactaaggttattaag
ctggagcaaaattatcgtagtacgggcgctattttggaggcagcaaataatgttatcgcc
aagaatattcagcgcacagacaagaaactatggactgatctcggcgacggttctcccgtg
caagtacaagggacgtatgacgaagctgaagaagcaagcttagtagctggacgcattgca
tcgcatgtcagcatgggcgcaagaacgtatggtgattttgcggtactgtaccgcactaat
gcgcagagttataccctcgagcgtgcacttcgcctgcagcgtgttccgtatcaactagtt
ggtggggtgaggttttatgatcgtaaagaaatcagagacattatcgcttatctacggctt
atctatcagccaaatgatcgaatgagttttagtcgtatcgcaaatattcccggtcgtgga
attggtgccacgagtttggagaagtttctggtctggcaatctgggtcacagatggatatt
attgcagcgctcacaaatgccgatcagacaacatctttaacgccacgcgcacgcattgct
tttaaggagtttggtgaaaagatgcgcattttacaggcgatggtaaagagcaatgcgacc
cctgcggacatcattgaaaaacttcttgctctgacaaattatcgaagctatcttctggat
ggaacgccgcaagctgaggagcgtgaagccaacgtcggtgcgttgatctcggaggtgcaa
gtatttgtcgacttacctgaatttcttgaagaggtggcacttgtctcgagtgcggacacg
tcggctggctccgataaggtaacgcttatgacgattcatgctgcaaaagggcttgagttt
cctgtggtatttatggttggcatggaggaggggatatttccacattcacgagtgtatgaa
tcgggtcccagtgagctcgaggaggagcgtcggctatgttacgtcggcatgactcgtgcg
cgggaagaactgcatttaagctatgctcagagtcggttgcaatttggacagcgtggatac
aatgatgtctcaagattcattgcggatatgggtgatcagttggcggctattgatgagccg
atcgtgcatgcagaacctgattactacagtgatgaactgtcgcttgagattggtgaccgt
gtgcgaacagcggctttcggtaagggcgaggtggttgatatcgaaggtttagcggtgact
atcacctttgacgatggaattacaaagaagctaaacgctgagtatgctcacttggagaag
ctatga
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