Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0801
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Entry
UW38_C0001G0801 CDS
T04605
Symbol
groL
Name
(GenBank) 60 kDa chaperonin, chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UW38_C0001G0801 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbag03019
]
UW38_C0001G0801 (groL)
03110 Chaperones and folding catalysts [BR:
sbag03110
]
UW38_C0001G0801 (groL)
03029 Mitochondrial biogenesis [BR:
sbag03029
]
UW38_C0001G0801 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbag04147
]
UW38_C0001G0801 (groL)
Enzymes [BR:
sbag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UW38_C0001G0801 (groL)
Messenger RNA biogenesis [BR:
sbag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UW38_C0001G0801 (groL)
Chaperones and folding catalysts [BR:
sbag03110
]
Heat shock proteins
HSP60 / Chaperonin
UW38_C0001G0801 (groL)
Mitochondrial biogenesis [BR:
sbag03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UW38_C0001G0801 (groL)
Exosome [BR:
sbag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UW38_C0001G0801 (groL)
Exosomal proteins of other body fluids (saliva and urine)
UW38_C0001G0801 (groL)
Exosomal proteins of breast cancer cells
UW38_C0001G0801 (groL)
Exosomal proteins of colorectal cancer cells
UW38_C0001G0801 (groL)
Exosomal proteins of bladder cancer cells
UW38_C0001G0801 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PhaC_N
Motif
Other DBs
NCBI-ProteinID:
AKM80641
LinkDB
All DBs
Position
723542..725188
Genome browser
AA seq
548 aa
AA seq
DB search
MAKKVFYDDDARERVLGGAKALYDAVKVTYGPKGRNVVIAKGYGGPTVTHDGVTVAESVD
LPENDDETLGYKVGAELIKQAASKLNKVAGDGTTTVTVLTYNILKEANRLIAAGHNPQEL
RKGIEEAGADVVKQLDKLAESIEGKKGRVAEVATISAGSREIGELIAGVIEKVGKDGVVT
VEAGQGLELEAEVVEGFNLDRGWVSPFFVTDAGRQEAVYEKPAVVITDKKVSSVQEFLPI
IEKLAQAGKKEVVLIADEVEGEVLSILVLNKLKGVLNTVAVKAPAFGDRRKEILQDIAVL
TGATVISEDQGLTFENVGLEVIGNARKVIVGKDDTTIIEGAGKAADVKARITQIVAQADN
ASSEYDKEQYEKRAAALSGKVAVIKVGGATETEIDEKKFRVDDAVAATKAALAEGIVAGG
GVTLVNLSATIKADGADSISAGRQILKNALRAPFLQITANAGLNSEALLAQVEAGKIGFG
IDVNAPEKGLVDVKKAGVIDPARVTKEAVQNAVSIASTAATMGALVVDIPEKEAPAPAGG
GMPGGMGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaagtattttatgatgatgacgctcgcgagcgtgtgctcggtggagcaaag
gcgctatatgacgcagtaaaagtaacctacggaccaaaaggtcgaaatgtggtgatcgca
aagggctatggtggaccaaccgtaacgcacgatggtgtcacggtcgctgaatcagtcgat
ctaccggaaaacgatgatgagacactcggctacaaggtcggtgcagaacttattaagcag
gctgcgagcaagctcaataaggtagcaggtgacggcacaacgacagtaactgtccttacg
tacaacattctcaaagaagcaaatcgtttgattgcggctggccacaatccacaagagctt
cgcaaaggtatcgaagaggctggcgctgatgtcgtcaagcagctcgataagcttgctgag
agcattgaaggtaaaaagggacgcgtggcagaggttgcgacaatctctgcggggagtcgt
gagatcggcgagcttatcgctggtgtgatcgaaaaagtcggcaaagacggcgttgttacc
gtagaggctgggcagggacttgagcttgaggctgaagttgttgaaggtttcaatcttgac
cgtggctgggtgagtccattcttcgtgactgacgctggtcgtcaagaagcagtgtacgaa
aagcctgcggtagttattacagacaagaaagtttcgagcgtacaggaattccttccgatt
atcgaaaagcttgcccaggcaggcaaaaaagaagttgtgctcatcgccgacgaagtagag
ggtgaagtattgagcatcttggtgctcaacaagctcaagggtgtgctaaatactgtagca
gtaaaagcaccagcatttggtgatcgccgaaaagaaatccttcaagacattgctgtactg
acaggtgcgacagtgatttccgaagatcagggtttgacgtttgaaaacgtaggactagag
gtaattggaaacgcacgcaaggtcatcgtcggcaaagacgacaccacaattatcgaaggt
gcgggcaaagcagctgacgttaaagcacgtatcacgcaaattgttgcacaagctgacaat
gcttcgagtgagtacgataaagaacagtacgaaaaacgtgctgcagcgcttagtggaaaa
gttgctgtcattaaggtcggtggcgctaccgagactgagatcgatgaaaagaaattccgt
gtagatgatgctgttgcggcgacaaaagcagcgcttgcagagggaattgttgccggaggt
ggtgtgacgcttgtaaacctttctgcaacgatcaaagccgacggcgccgacagtattagt
gctggtcgtcagatcctcaaaaacgcacttcgtgcgccattccttcagattaccgcaaat
gccggcctcaatagtgaagcacttcttgcgcaagtagaagcaggcaagattggctttggt
atcgatgtgaatgcgccagaaaaggggctcgttgacgtaaagaaggctggtgttatcgat
ccagcacgcgtaacgaaagaagctgtgcaaaacgcagtttcgatcgcatcaactgctgcg
acaatgggagcgctcgttgtcgatattccagaaaaagaagctccagctcctgctggcggc
ggcatgcctggtggcatgggcttctag
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