Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0847
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Entry
UW38_C0001G0847 CDS
T04605
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbag03016
]
UW38_C0001G0847 (truB)
Enzymes [BR:
sbag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UW38_C0001G0847 (truB)
Transfer RNA biogenesis [BR:
sbag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UW38_C0001G0847 (truB)
Prokaryotic type
UW38_C0001G0847 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKM80686
LinkDB
All DBs
Position
768677..769336
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AA seq
219 aa
AA seq
DB search
MTDGIILIDKPAEMTSFGVVARIRRVLTNQQQKKVKVGHTGTLDPFATGLMILVIGKECK
NAGMYTKLDKVYEATFRLGQTSTTGDPEGELTDVSDRRPTLDEIKLALSKFTGEIWQRPP
IFSAIKIDGQRAYKLARDGQDVEIPERQITIHSLELVSYDYPNLKVRTHVSSGTYIRSLC
VDIGEALETGAYCTELRRTAISKWSIDDAETLQSFGVTS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacagatggaattatactaatcgataagcctgcagagatgactagttttggtgtcgtg
gcccggattcgaagagtactcacaaaccaacagcaaaagaaagtaaaagtagggcatact
ggcacgctcgatccattcgcaacaggacttatgattttggtgattggcaaagagtgtaaa
aatgctggaatgtataccaaactcgataaggtgtatgaggcgacatttcgactcggccaa
acaagcacgacgggcgatccggagggtgagcttactgatgtttctgataggcggcccact
ctcgatgaaataaagctggcactttctaagtttaccggggagatatggcaacgaccgccg
atttttagtgcgatcaagattgatggccagcgtgcctacaaactggctcgagacggccaa
gatgttgagattccagagaggcagattacgattcacagccttgagctcgtgagctatgac
tatccaaatctaaaagtacgtacacatgtcagtagcgggacgtatattcgtagtctttgt
gttgatattggtgaggcgcttgaaacgggcgcgtactgcacggaacttcgacgaacagcg
ataagcaagtggtcgattgatgatgccgaaacacttcagtcgtttggtgtgacgagttaa
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