Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G0863
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Entry
UW38_C0001G0863 CDS
T04605
Name
(GenBank) Beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Pathway
sbag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UW38_C0001G0863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbag03019
]
UW38_C0001G0863
Messenger RNA biogenesis [BR:
sbag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UW38_C0001G0863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF2674
Lectin_C_term
Motif
Other DBs
NCBI-ProteinID:
AKM80702
LinkDB
All DBs
Position
782798..784981
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AA seq
727 aa
AA seq
DB search
MGQRRLSNAAPDDQTKRPQGQQRPKSNNTVLNNTSTRKGEVFRAQRRTSENVNLRASQHV
INIPVNKSLYNGYKGRQFSVADQKKMPRTNAPKLKIMPVGGLGEMGIGKNMMAIEYDNDI
IIIDCGFLFPGADYPGINYITPDISYLEENKHKIRAQVFTHGHLDHIGAFRHIAHRLPAP
VYGSKFTLGMVQRTMEEATSGFEPVYHEMDPESHERVQIGDNFSIELVRVNHSIPDATAV
VVRTPLGVLIDTGDWRFEDNPVDGKKFDLERLTEIATTEGILMLMNESTNCESDGTHTHG
EFDIQQSMGQVMEKHLNSRLIISCFSSQIHRMQVILEEAKKHDRKVAFAGYSMIQNLEVA
LRAGTIKIPKDVVVKMEDVVKLPDGKVTIVCTGSQGEFNAVLNRMASGAHKFIKIKNSDV
VVFSSNPIPGNEKYVTRTVDGLMREGSGVIQNGKTHLTGIGPLHLSGHGYYDDHVKLINA
LNPKYYLPIHGEFHMLVHNAELAEKEAAIPRDNIFVCDSGDVIEIDVDGARKAGRIPVGG
IMYDDSGAIVSEVVLKDRIHMATEGMFVVVLTVARGSGRLMTSPDIISRGFIYLRDSEEL
MGTIRQYLKQKVARSFASKRYDLDQIKKELKDEITHILYDQTRRTPIVIPVINEIGGGGQ
NRDNRDREPRANGEGQNRQNTGPVRRNGSNSGGERDFVRPAPKTFPAKQVPDTEATEPRN
RTDTPAY
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaacgaagactctctaatgcagcaccggacgatcagacaaaacgaccacaaggt
cagcagcgtccaaaatcaaacaacaccgtacttaacaacacgagcactcgcaagggtgaa
gtgtttcgcgcgcagcgccgtacaagcgagaatgttaatcttcgtgcatcacagcatgtt
atcaacattccggtaaacaaatcactatataacggctacaaaggtcgtcagtttagtgtg
gctgatcaaaagaaaatgccacgtacgaacgctccaaagctaaagatcatgccagttggc
ggtcttggtgagatgggtattggtaaaaacatgatggcgatcgagtatgataacgacatt
atcatcatcgattgtgggttcctgttcccaggtgccgactatccaggcatcaactacatc
acacctgatattagctatcttgaagaaaacaagcacaagattcgtgctcaagtatttaca
cacggacaccttgatcatatcggtgcattccgtcatatcgcacaccgtcttcctgcgcca
gtatatgggagtaagtttactctcggtatggtgcagcgcacgatggaagaagcaacgagc
ggctttgagcctgtctatcacgaaatggacccagagtctcatgaacgtgtacagatcggt
gataatttcagtatcgaactcgtacgagtaaaccactcgatcccagatgcaactgcggtt
gttgttcgtacgccacttggtgtacttatcgatactggcgactggcgctttgaggacaat
ccagttgacggtaagaagtttgaccttgaacgtttgacggaaatcgctacaactgaaggc
attttgatgctcatgaatgagtcaacgaactgtgaatcagacggtacgcatacgcatggt
gaatttgatattcagcaaagtatgggtcaggtgatggaaaagcatcttaacagtcgcttg
atcatcagctgtttcagtagccagattcaccgtatgcaagtgatcttggaggaagcaaag
aaacacgaccgtaaggttgcgtttgctggttatagcatgatccagaacctcgaagttgca
cttcgtgcaggcacgatcaaaattccaaaagacgttgtcgtcaaaatggaagacgtcgta
aaactccctgacggtaaggtgacaattgtttgtactggctcacagggtgagttcaacgct
gttcttaaccgtatggcgagcggtgcgcataaatttatcaagattaaaaacagcgatgtt
gttgtgtttagctcaaacccaattccaggcaacgaaaaatacgtgacacgtacagtggat
ggcttgatgcgtgaaggtagtggtgttatccaaaacggtaaaacacaccttacgggcatc
ggtccgctacacctttcgggacacggctactatgacgatcacgtaaaacttatcaatgcg
ttaaatccaaagtactacctcccaattcacggtgaattccatatgctcgttcacaatgct
gagcttgcagaaaaagaagcggcaattccacgtgacaacatctttgtttgtgacagtggt
gatgtgattgaaatcgacgtcgatggtgcacgcaaggcaggccgaattcctgttggcggt
atcatgtacgacgatagtggtgcgattgtatcagaagttgtcttgaaggaccgaatccat
atggcgacagaaggtatgtttgtagtagtgctcacagttgcgcgcggtagcggtcgattg
atgacaagcccagatattatctctcgtggcttcatctacctccgtgacagcgaagagttg
atgggaacaatccgacagtatttgaagcaaaaggttgctcgcagctttgcaagcaagcgc
tacgatcttgatcagatcaagaaagagctcaaggatgagattacgcatattttgtatgac
cagacgcgtcgtactcctatcgtcatcccagtgattaacgaaatcggtggcggtggtcaa
aaccgcgataatcgtgatcgtgagccacgagcaaatggcgaaggacagaatcgccaaaat
actggccctgtacgtcgaaatggcagtaatagcggtggcgagcgtgattttgttcgccca
gcgccaaagacattcccagctaagcaagttcctgataccgaggcaaccgaacctcgcaat
cggactgatacgccagcgtattag
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