Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17: UW38_C0001G1062
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Entry
UW38_C0001G1062 CDS
T04605
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sbag
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
Brite
KEGG Orthology (KO) [BR:
sbag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbag03032
]
UW38_C0001G1062
03029 Mitochondrial biogenesis [BR:
sbag03029
]
UW38_C0001G1062
Enzymes [BR:
sbag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
UW38_C0001G1062
DNA replication proteins [BR:
sbag03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
UW38_C0001G1062
Mitochondrial biogenesis [BR:
sbag03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
UW38_C0001G1062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
AAA_16
DEAD
Pif1_2B_dom
CobA_CobO_BtuR
AAA_5
AAA
AAA_14
AAA_24
ATPase_2
SH3_13
nSTAND_NTPase5
AAA_7
UvrD_C_2
AFG1_ATPase
Mg_chelatase
cobW
T2SSE
AAA_25
Herpes_Helicase
ABC_tran
TsaE
TrwB_AAD_bind
nSTAND3
P-loop_TraG
AAA_11
ATPase
RsgA_GTPase
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AKM80892
LinkDB
All DBs
Position
970967..972493
Genome browser
AA seq
508 aa
AA seq
DB search
MNQGLALEIMLSGESVLLTGPAGAGKTFVLNQFIKIAKADGKHVSVTATTGLAATHLGGT
TIHSWSGMGILDHIPEGFAAHVAKGRREIIEKTDVLIIDEISMLHDYRLDMVDEVCRLIR
RKDIPFGGIQVIMSGDFFQLPPINRGDSRAGGFVVHSNVWQELDPTICYLQEQHRQDDEH
LLDILNSLRAGDIRRHHAEKLLARVEATPPEGMVMTELHTVNIDVDKLNEQRLDALSGDE
LFYTQSTTGADNYVENLQRSVLAPATLRLKKGALVMAVKNATDRRYANGSIGTVIDFESG
TEYPVVEFKTGRIVSMQPDSWELRDGDKKRASISQIPLRLAWAITVHKSQGMTLDAARID
LRKAFVEGMGYVALSRVKNLENLYLEGINRMALAVSEDAQAIDANLRTRASNDVKKFSHL
EVKAEKRKHAPEPKKKPAVGSSGWADKIAKMRETHPNAYKPWTNQDDSLLKQEFQNGVSV
AGLSEQLGRHEGSVKMRLQKHFGEDAVQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagggattagctctagaaattatgctttcaggtgaaagcgttttgttgaccgga
ccagcgggagcaggtaagacatttgtattaaatcagtttattaagattgctaaggctgac
ggcaaacacgtctctgtaaccgctacgacaggactagccgccacgcacctaggtggtacg
acaattcattcttggtcgggaatgggtattcttgatcatattcccgaggggtttgcggcg
catgttgcaaaaggtcgtcgagaaattatagagaagactgatgtattgattatcgatgag
atttcgatgttgcacgactatcgtcttgatatggttgatgaggtatgtcggctgattcgg
cgaaaagatattccatttggcggcatacaggtgattatgtctggagacttcttccagtta
cctccaataaatagaggtgattcacgtgcaggtggatttgttgtacatagtaacgtctgg
caagaacttgacccgacgatctgctatctccaggaacagcaccgtcaggatgatgagcat
ctcctcgatattctcaattcacttcgagccggcgatatacggcgtcatcatgccgaaaag
ctgcttgcacgtgtcgaggctacgccacctgagggtatggtgatgactgagctacatacg
gtgaatatcgatgtcgacaaactaaatgagcaacgactcgatgcgctttcgggtgatgag
cttttttatacacagtcaacaacgggagctgacaattacgttgaaaaccttcaacgatcc
gtacttgcccctgcgacacttcgactcaaaaaaggtgcgttggtaatggcagtgaaaaac
gcaactgatcgtagatatgccaatgggagtattgggacggtgattgattttgagagcggt
actgaatatcctgttgttgagtttaaaacggggcgtattgtgagtatgcagcctgatagt
tgggagcttcgcgatggcgacaaaaagcgtgcgagtatcagtcaaatccctcttaggctt
gcctgggcgattacggtccacaagagtcaaggaatgacgctcgatgccgcaaggattgat
ctgcgaaaagcatttgtagaggggatgggatatgtggcgcttagtcgtgtgaaaaatctt
gagaatctctatctcgaaggaattaatcgtatggcgcttgcggtgagcgaagatgctcag
gctattgacgcgaatctgcgcacacgagcaagtaatgatgttaaaaaattctcacatctt
gaggtcaaagctgaaaaacgtaagcatgcacctgagcctaagaaaaagccagccgtaggg
tcgagtggttgggctgataaaattgctaagatgcgcgagacgcatccaaacgcgtataag
ccatggacaaatcaggacgattctctcttaaaacaagaattccaaaatggtgtttccgtt
gcgggactaagtgaacagcttggtcggcatgagggaagcgtgaagatgcgtctgcaaaag
catttcggtgaggatgcagttcagtaa
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