Salinicoccus bachuensis: RQP18_05800
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Entry
RQP18_05800 CDS
T10955
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sbah Salinicoccus bachuensis
Pathway
sbah03410
Base excision repair
sbah03430
Mismatch repair
sbah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RQP18_05800 (recJ)
03430 Mismatch repair
RQP18_05800 (recJ)
03440 Homologous recombination
RQP18_05800 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbah03400
]
RQP18_05800 (recJ)
DNA repair and recombination proteins [BR:
sbah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RQP18_05800 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RQP18_05800 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RQP18_05800 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
WZX30707
LinkDB
All DBs
Position
1180379..1182637
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AA seq
752 aa
AA seq
DB search
MKHMYQSKYEWKVRRKTSDIPEEVREKFKLNPLEQTILENRGFTTEADLEKIYHPKTYDA
ALVHMMDTAVARIEAALDGGERILVYGDFDADGITSTVLLLTALRRKAGNDSVDFFIPNR
IEDGYGPNQAIFEEIVVGQYDLVITVDNGVSGGKEIAFLTSRGVDVIVVDHHAFGENVPD
VPILHPDHPDGEYPFKSLAGVGITYKLVQALGLDSKEDLGWVAIGTVADLVPMIDENKRL
VIEGLKILNDTPPAGVHTLLRSAGSDGYIDEETIAFGLAPRLNATGRLGEAEIAVELLLE
EDTNLAYEQAVVVENMNMERKQLVETIFSEADADIDPANQINIIYREGWHPGVLGIVASK
IVEKYGKPAIVLTQEDDVYRGSARSIEGVDLHEILTDHSQFHHRFGGHALALGVEVPASS
IEAFREELEQHMNGLQLNLRPLKHIDYQIKQGNMSMKAFERFDRLKPFGQSFQSPVFLLT
NENIGTIKQVGKDRSHIKLSMPKVGMDVIGFGFGHLINEVSTEDSISLVGTVNVNEFSQK
RTLQMMLQDASVDSVQLIDMRSRTDQRFDIITQEDVFVIAESREKKGDNYYHFGEALPFT
SKTVVLRDLPESLENLSYSLREIHASKIIALFHQKEELFFTGIPKPADISNVLQLVEKAE
DGSIDLARHAPALADRLGMKMKFLKMTIDIMTDLEIITLKNGIVYKGQEDGSWKLEESRH
YQKLKNQLEAEKLLKMSSSSELKEYLRSLISN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatgtatcagtcgaagtacgagtggaaagtaagacgcaaaacctctgatatt
ccagaggaagtccgagaaaagttcaaattgaatcctctggagcagaccatactggaaaac
agggggttcacgacagaagcggatctggagaagatctatcatccaaagacttatgatgct
gcgctcgtccatatgatggacacggccgtggcacgcatagaggctgccctggatggtggt
gaacgcatactcgtctatggcgactttgatgcggacggcatcacaagcacggtgctgctt
ctgactgcactcaggaggaaagccggcaatgacagtgtggacttcttcatccccaaccgc
atagaggatggatacggccccaaccaggccatattcgaagaaatcgtcgtcggccagtat
gatcttgtcatcaccgtcgacaatggggtatcaggcggcaaggagattgcgttcctcact
tcccggggcgtggatgtgattgtggtggatcaccatgcattcggggagaatgtgcccgac
gtcccgatcctccatccggatcatcccgatggggagtatccattcaagtccctggccggg
gtcggcatcacctacaagcttgtgcaggcactcggtctcgacagtaaggaggacctcggc
tgggtggcgatcggcacggtcgccgaccttgtaccgatgatagatgaaaataaaaggctc
gtcatcgaagggttgaagattctgaatgacacgccgccggcaggtgtccatacactcctg
agaagtgcagggagtgacggttacatcgatgaagagaccatcgctttcggtctggcgccg
cgcctcaatgcgacagggcggctcggagaggcggaaatcgctgttgagcttctcctcgag
gaggatacgaaccttgcctatgaacaggctgtagtcgtcgaaaatatgaatatggaacgg
aagcagctggtggagacgatcttcagcgaggcggatgcagatatagatcccgccaatcag
atcaatatcatctatcgggaaggatggcatccgggcgtgctcggcatcgtcgcttcgaag
atcgttgaaaaatatgggaaaccggcaattgtactcacccaagaagacgatgtgtatcgc
gggtcggcccgttcgatcgaaggggtggacctgcatgaaatcctcacggaccattcacag
ttccatcaccgcttcggcgggcacgcgctcgcgctcggtgtggaagtgcctgcatcaagt
atcgaggccttcagggaggagctcgagcagcatatgaacggcctgcagctgaacttgagg
cccttgaagcatatagactaccagatcaagcaggggaacatgagcatgaaggcattcgaa
cggttcgaccggctgaaacctttcggccagtccttccagtccccggtattcctcctcacc
aatgaaaatatcggcacaataaaacaggtcggcaaggaccggtcccacatcaaactgtcc
atgccgaaagtcgggatggatgtcatcggcttcggtttcggccacctgatcaatgaagta
tccacggaggattcgatcagtctggtcggaacggtcaatgtaaatgaattcagccagaag
cggacgcttcagatgatgctgcaggatgcgagtgtcgacagtgtccagctgatcgacatg
agaagccgtaccgaccagcgctttgatatcattacacaggaagatgtattcgtcatagcc
gagagcagggaaaaaaaaggggacaactactatcacttcggcgaagcactcccgttcaca
tcgaagacggtggtgctcagggatcttcctgaaagcttggaaaacctgtcgtattcactg
agggagatccatgcctccaaaatcatcgccctcttccatcagaaggaagaactgtttttc
acaggcatacccaaaccagccgacatatcgaatgtgctgcagctggtcgaaaaagcggag
gatggctcaatcgacctcgcgagacatgcgccggccctggctgaccggctcggcatgaag
atgaaatttcttaagatgaccatcgatattatgacagatttggagattatcacattaaaa
aatggtatagtatataagggtcaggaagacggaagctggaagttggaggaatcacggcat
taccagaaactcaaaaatcagctggaagctgaaaaacttcttaagatgtcctcttcgtct
gaactgaaagagtatctcagatcattaatttcgaattga
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