Salinicoccus bachuensis: RQP18_10215
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Entry
RQP18_10215 CDS
T10955
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbah Salinicoccus bachuensis
Pathway
sbah03420
Nucleotide excision repair
sbah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RQP18_10215
03430 Mismatch repair
RQP18_10215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbah03400
]
RQP18_10215
Enzymes [BR:
sbah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RQP18_10215
DNA repair and recombination proteins [BR:
sbah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RQP18_10215
MMR (mismatch excision repair)
Other MMR factors
RQP18_10215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
DEAD
AAA_22
ATPase_2
AAA
AAA_16
AAA_24
ATPase
AAA_23
AAA_25
RNA_helicase
AAA_5
Mg_chelatase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WZX29028
LinkDB
All DBs
Position
2009955..2012027
Genome browser
AA seq
690 aa
AA seq
DB search
MKILSFEEEARHLTFIVDFLKIFNADLETRQNRTAQGILDTRYDINENISNVVDFADGNV
MEFVQMLPEIRRTEMNYNYIETMRERTERMIPKPYFGKITVDGEPIYIGTGTIKNRDNDI
LIYDWRTPVASLFYENRTGDLSYRIPDGSRIDATVEQRRQFIIEDGALLNMFDSDVYIGD
EILQRMITDSSQSKLKNIVSTIQQEQNDIIRLPLSQDTLVYGPPGSGKTSLAMQRIAFLL
YQHKETLDPENILLISPNEVFNDYLSDVLPELGENHVRNTTFYRLISQFPYFKGRNFEHV
YDNIKRLRENDEGHDIYEFKNSLEYFKSLHGFMKHLETDGMEFRTLQGENGLFYSKEQLV
HVFYNELGDHPISRRLSKMQERLLSLYTEEVKRLTNEKYTELRDSNKYIGEAHELKKEAH
DFAKKQLKTVHRQVALFRFVHFEKLYVKSIYDKKFRNRTVRSVKENDFKYEDIAPMLYMY
IHLLGKNDRQIQHVLIDEVQDYSNIQYYVMRHYYRKATFTSLGDPNQQIHPGRKDALVAK
NHVQKRLERSYRSTNQINAFLNSIIPGSIQSASVDGDEVQKLHTDDEIGHVREVLRSGEY
PQVAIITPSRDAADHYYAQLKDEFPHMKNLGETDTLYNQSFIILPYYLSKGFEYNTVILT
DAQSYSDSKHILYVLASRATRHLHLLNPTE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctatcatttgaagaagaagcccggcacctgaccttcatcgtcgattttctc
aaaatattcaatgccgacctggaaacgaggcagaaccgcacggcccagggcatactggat
acaagatacgacatcaatgaaaacatctccaatgtcgtcgattttgccgatggcaacgtc
atggagttcgtccagatgctgccggaaatcagaagaaccgaaatgaactacaattatata
gagacgatgcgtgaacgcacagaacgcatgataccgaaaccctatttcggcaagatcacc
gtcgatggggagccgatctatatcggcaccggcacaataaagaaccgcgacaatgacata
ctgatctatgactggcgtacgccggtcgcaagcctgttctatgaaaacaggaccggcgac
ctgtcataccgcattccggatggcagcaggatagatgcaaccgtcgaacagaggcgccag
ttcatcatcgaagacggcgccctcctcaacatgttcgacagcgatgtatatattggtgat
gagatcctgcagcgcatgatcaccgactcctcccagtcgaagctcaaaaacatcgtctcg
accatccagcaggagcagaatgacatcatccgcctcccgctttcccaggatacgctggtc
tatgggccgcccggcagcggaaaaacttcccttgccatgcagcggattgcatttctgctg
taccagcacaaggagaccctcgatccggagaacatactgctcatttcgccgaatgaagtg
ttcaacgactatctgtccgatgtcctgccggagcttggcgaaaaccacgtgcggaacacg
acgttctaccgcctcatctcacaattcccctacttcaagggaaggaacttcgagcatgtc
tatgacaacatcaaacgcctgagggaaaatgatgaagggcatgacatctatgaattcaag
aattccctcgagtacttcaaatccctccatggcttcatgaagcatcttgagaccgacggc
atggagttcaggaccctgcagggcgagaatggactgttctacagcaaggaacagctggtc
cacgtcttctataatgaacttggcgaccatcccataagcaggaggctctcgaagatgcag
gaaaggctgctcagcctgtataccgaggaagtcaaaagactgacgaatgaaaagtacacg
gaactgcgcgacagcaacaagtacatcggcgaggcgcatgaactcaagaaagaggcacat
gattttgccaaaaagcagctgaagaccgtgcaccgccaggtcgccctgttccggttcgtc
cactttgaaaaactgtatgtaaagtcgatatacgataagaagttccgcaaccggaccgtg
cgctccgtcaaggagaatgatttcaagtatgaggacatcgcaccaatgctctatatgtac
atccacctcctcggcaaaaatgacaggcagatccagcatgtactgatcgatgaggtccag
gactattcgaacatccaatactatgtcatgcgccattactataggaaggcgacgttcacg
agcctcggcgacccgaaccagcagatccaccccggcaggaaggatgccctggtcgccaaa
aaccatgtccagaaaaggctcgagcgctcctaccggtccaccaaccagatcaatgcattc
ctgaacagcatcatccctggttccatacagtccgcttccgtcgatggggatgaggtgcaa
aaattgcacaccgacgacgaaatcggccatgtcagagaggtgctccgctccggagagtac
ccgcaggtcgccatcatcaccccttcaagagacgcagccgaccactattacgcacagctg
aaggatgagtttccgcacatgaagaatctcggggagacggatacactgtacaaccagtcg
ttcatcatcctgccctactacctgtcaaaagggttcgaatacaacacggtgatcctgacg
gatgcacagtcctacagcgattcgaagcatatactgtatgtgctcgcctcccgcgccacg
cggcatctccacctgctcaacccgactgaatag
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