Candidatus Sulfurimonas baltica: HUE88_01635
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Entry
HUE88_01635 CDS
T07552
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sbal
Candidatus Sulfurimonas baltica
Pathway
sbal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE88_01635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbal03019
]
HUE88_01635
03009 Ribosome biogenesis [BR:
sbal03009
]
HUE88_01635
Enzymes [BR:
sbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUE88_01635
Messenger RNA biogenesis [BR:
sbal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUE88_01635
Ribosome biogenesis [BR:
sbal03009
]
Prokaryotic type
rRNA helicases
HUE88_01635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QOY52425
UniProt:
A0A7S7RNG3
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All DBs
Position
complement(333831..335447)
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AA seq
538 aa
AA seq
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MQENAQTNAEQINEEPTITFDDLGLNKDILRAVKDAGFTVPSPIQAAAIPFILAGRDIVG
QAHTGTGKTAAFGLPALNNIDPKSGVSILIITPTRELATQVSDEMFKYGRNINARTVTVY
GGSSYNRQIDLIERGASVVVATPGRLLDILKKNLVKDFAPSIVVLDEADEMLDMGFLDDI
NEIFSYLPTNRQTLLFSATMPKPIKLLAERILDNPEFISITQGETTNTDISQEYYVIEES
ERDDAIIRLMDAEDTKKCVVFCRTKSEVDRLSNVLSNAGYLANGLHGDMEQRQRETVIKG
FKSNSVKVLVATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLT
PLEFKELQRIKSKVGTTMTHAFVPSKNDLRALNLKSIVKTIEDQHIYDEAHQILDMLKED
IDEATIMFKLVSMILDRQAVKGPNTIGIPADKLAAILERAASRNDSRGGRGGYKGNRNRS
GGGGDRNRSGGSGDRNRSGGASSGGGYRGGSSAGGGSSTGGDRSRSGGGDRNRNRTRD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatgcacaaacaaacgcagaacaaattaatgaagagccaacaatcacattt
gatgatttaggtttaaacaaagatatactaagagcagttaaagacgcaggttttacagtt
cctagccctattcaagcagcagcaataccatttatattagctggtcgtgacatagttggt
caagcacacactggtactggtaaaacagctgcttttggtcttcctgcactaaacaatatc
gatccaaaaagtggtgttagcatactaataataactccaactcgtgaacttgctactcaa
gttagtgatgagatgttcaaatatggtagaaatataaatgctagaacagtgactgtttat
ggcggtagctcttacaatagacaaatcgaccttatcgaaagaggtgctagtgttgttgtt
gcaactccgggtagacttttagatattcttaaaaagaatctagttaaagatttcgctcca
agcatcgttgtactagacgaagctgacgagatgcttgacatgggatttctagatgatatt
aatgaaattttttcatatcttccaacaaatcgtcaaacacttttattctcagcaactatg
cctaaacctatcaagcttctagctgaaagaatcttagataatccagagtttatatctatc
actcaaggcgagacaactaatacagatatatctcaagagtattatgtaatcgaagaatct
gagagagatgatgcgattatccgtcttatggatgctgaagatactaaaaaatgtgtagtg
ttttgtagaacaaaaagtgaagttgatagactttcaaatgttctatcaaatgctggatac
ttagctaatggtcttcacggagatatggagcaacgccaacgcgaaactgtaattaaaggt
ttcaagagcaatagtgttaaagttttagttgctactgatgttgccgctcgtggtatacat
gtagataatatatctcatgttttcaattatcacataccttttgaccctgagtcttatgtt
caccgtattggtagaactggccgtgctggaactaaaggtaaggctattacgcttttaact
ccattagagtttaaagaacttcaaagaatcaaatcaaaagttggaactacaatgactcat
gcatttgttccaagtaaaaatgatttaagagctttaaacttaaaatcaatagttaaaaca
atagaagaccaacacatctatgatgaagctcatcaaattcttgacatgttaaaagaggac
atagatgaagctactattatgtttaaacttgtttccatgattttagatagacaagcggta
aaaggtccaaatactatcggtataccagctgataaattagctgctattttagagcgtgct
gctagtagaaatgatagtagaggcggccgtggcggttataaaggaaatagaaatcgttct
ggtggcggtggagatagaaatcgttctggcggtagtggagatagaaatcgttcaggtggt
gctagttctggcggtggataccgtggtggaagttctgctggcggcggaagttctactggt
ggtgacagaagccgttctggcggcggtgatagaaaccgtaacagaactagagactaa
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