Candidatus Sulfurimonas baltica: HUE88_07675
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Entry
HUE88_07675 CDS
T07552
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbal
Candidatus Sulfurimonas baltica
Pathway
sbal03030
DNA replication
sbal03430
Mismatch repair
sbal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUE88_07675 (dnaE)
03430 Mismatch repair
HUE88_07675 (dnaE)
03440 Homologous recombination
HUE88_07675 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbal03032
]
HUE88_07675 (dnaE)
03400 DNA repair and recombination proteins [BR:
sbal03400
]
HUE88_07675 (dnaE)
Enzymes [BR:
sbal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUE88_07675 (dnaE)
DNA replication proteins [BR:
sbal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUE88_07675 (dnaE)
DNA repair and recombination proteins [BR:
sbal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUE88_07675 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
SpoOE-like
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QOY51022
UniProt:
A0A7S7LTG5
LinkDB
All DBs
Position
complement(1533351..1536956)
Genome browser
AA seq
1201 aa
AA seq
DB search
MSAQPFTHLHLHTEYSLLDGANKLSNLVSRVKELGMTSVAMTDHGNMFGAIDFYQQMKGA
GIKPIIGMEGYIHNGDTLDDKSTKQRFHICLFAKNQKGYENLMYLSSKAFIDGFYYFPRI
NKKELREHSEGLICTSACLQGEVNWHLNLQNERNVRNGALGYVGAVAVAQEYKDIFGDDF
YLELMRHGIGDQLFIDDQVLKISKELDIKIVATNDTHYTYPGDAQYHEAFMCIGMNKLYD
DPNRMRHSVHEFYLKSPEQMARIFADIPEALTHTQEIVDKCNLELKLGDPIPPNFKFTPE
YSKNDGLDINHEDDSPLASDASLEDKKKWFSGIDKNDAEYFIHRCEVGLIERLKHVSEEK
HEEYRDRLKFEMDVINSMKFPGYMLIVWDFVKVAKERGIAVGPGRGSAAGSLVAYSLDIT
DIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVEKYGRNQVAQIITFGSLL
AKGVIRDVARVLDMPLSQADKMAKLIPDELGITLNGKTKNGDFIAGAFQKEPKLQELIES
DANSKRVWEFAKKLEGLKRNSGIHAAGVVISNEELWYKTPIYKPSGETTFVTQYSLNYLE
DVDLIKFDFLGLKTLDVIDNAIKLIKRRYDKDVVWHKIDENDPKVYDVIRGGDTVGMFQI
ESSGMQDLNKRLKPDNFEDLIAVLALYRPGPMESGMLDSFIERKHGREAIEYTFDTMESI
LGKTYGVIVYQEQVMQIVQTIGGFSLGYSDIIRRAMGKKKDMSVFNHEFSDGAQKQGYDY
DKASKLFDLIEKFAGYGFNKSHSAAYAMITFQTAWLKTYYPNEFMAALLTSDKDNTDKVV
RYIDEVKRMGIELSPPDVNDSYMEFSAITKDDKEIILFGLGAIKGVGGAAVESIIQTREQ
DGEFTSIENFVNRIDPSKVNKRFVESSIKSGGFDRFGYSRKALLDQIELIVETAKDAATA
RKNAVGSLFGDDEEITTVKLSLKNSDEYELKEILEFEKETLGFYVSGHPLDKYREQMSEL
NYTMSSEIESVKDGSSAIFIGKVEEIQKKVSKKGNQFGIVNLMDFHGNVEIMLFSDKLDE
LNEMNLEEPVAFKTKITHTEMFTRIGVSKIMTLKEAIKETKKTKKEVREAPLEPIHLAIR
LDSETTILDELYTLVRQNPGNRELKLTIISKLQNVVIDSAIRVDSKILTALDGNLHVDIL
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacaacctttcacacatttacatcttcatactgagtattcactactagatggt
gcaaacaaactaagcaatttagtctctcgcgttaaagagcttggtatgacttcggttgct
atgactgaccatggaaatatgttcggtgcaatcgacttttatcagcagatgaaaggtgcg
ggaattaaacccattattggaatggaaggttatattcataatggcgacacactagatgac
aaaagtacaaaacagcgttttcacatctgcctttttgctaaaaatcaaaagggttatgag
aaccttatgtatctatcctctaaagcttttatagatggcttttactattttccccgcata
aataaaaaagagcttcgtgaacatagcgaagggcttatctgtacatctgcatgtcttcag
ggtgaagtaaactggcaccttaacctgcaaaatgagagaaatgtaagaaatggcgctttg
ggatacgtcggagcggttgctgttgcacaagagtataaggatatattcggcgatgacttt
taccttgagcttatgcgtcatggtataggtgaccagctatttatagatgatcaggtactt
aagatatcaaaagagttagatataaaaatagttgctacaaatgacactcactacacatac
ccgggtgatgctcagtatcatgaagcgtttatgtgcatagggatgaataaactctatgat
gaccctaaccgtatgcgccactcagtacatgagttttacttgaaatctccagagcagatg
gcaagaatatttgcagatattccagaagcactcacacacactcaggagatagttgataag
tgtaacttagagcttaagctgggtgacccgattccgccaaattttaaatttactcctgag
tactctaaaaatgatggtctagatataaatcatgaagatgattctccacttgcatccgat
gcctcactagaagataaaaaaaagtggtttagcgggattgacaagaatgatgcagagtac
tttatacatcgttgtgaagttggccttatagagagacttaagcatgtgtcagaagaaaag
catgaagagtatagagatagacttaagtttgagatggatgtaataaactcaatgaagttt
cccggctatatgttgattgtttgggattttgtaaaggttgctaaagagagaggtatagcg
gttggtcctggtcgtggttctgctgctgggagtctggttgcatattcactagatattaca
gacattgaccctatgaaatacgacctcctctttgagagattcctaaatcctgaacgtgtt
tcaatgcccgatatagatatggactttatgcaagcacgtcgcggagaggttatagactat
gttgttgagaagtacggacgtaatcaggtagctcagattattacctttggttctctacta
gctaaaggggttataagagatgttgcccgtgtacttgatatgccgctttctcaagctgac
aagatggcaaaacttatacctgatgaacttggtattactctaaatggtaaaacaaaaaac
ggcgactttatagctggggcttttcaaaaagagccaaaactccaagagcttatagagagc
gatgcaaactcaaagagagtatgggaatttgctaagaagctagagggtcttaaacgtaac
tcaggtatacatgcagcgggtgttgttatctctaatgaagagctatggtataagacacct
atatataaaccttcaggtgagacaacctttgtaactcagtactcacttaactatcttgaa
gatgttgaccttataaaatttgacttccttggtcttaaaactcttgatgttatagataat
gctattaagctgataaagagaagatatgacaaagatgtagtttggcataaaatagatgag
aatgaccctaaggtttatgatgtaatccgtggaggagacactgtaggaatgtttcaaata
gagtcctccggtatgcaggatttaaataaacgactaaagccggacaactttgaggacttg
attgcggtcttggcactttaccgtcctggtcctatggagtctggaatgcttgacagtttt
attgagagaaagcatgggcgtgaggctattgagtacacttttgacactatggagtctatt
cttggaaagacttacggggtcatcgtttatcaagaacaggtaatgcagatagttcagact
atcggtggtttttctcttggatattctgacattatccgtcgtgccatgggtaagaaaaaa
gacatgagtgtttttaatcatgagtttagtgacggtgcacaaaagcagggttatgattat
gataaggcctcaaaactatttgatttgattgagaagtttgcagggtatggttttaacaag
tctcactcggcagcctatgcgatgattacctttcagactgcatggctgaagacatactat
ccaaatgagtttatggcggcacttttaacctcggacaaggacaacacagataaagttgtt
cgttatatcgatgaggtaaagagaatgggaattgagctctctcctcctgatgtaaatgac
tcatacatggagttttccgcaataactaaagatgacaaagagataattctttttggttta
ggtgccattaagggagtaggtggggctgctgttgagtcgattattcaaactagggaacaa
gatggtgagtttacctcgattgagaattttgtaaaccgtatagacccatcaaaagtaaat
aaacgatttgtagaatcaagtataaagtcaggtggttttgacaggtttggctactcgaga
aaagctcttttagaccagatagaactaatagttgaaactgctaaagatgctgcaactgcc
agaaaaaatgccgttggcagtctctttggcgatgatgaagagattaccactgtaaaatta
tctcttaaaaactcggatgaatatgagctaaaagagattttggaatttgaaaaggagacc
ttgggattttacgtatcaggacatccgcttgataagtatagagaacagatgtctgaatta
aactacactatgtcatcagagattgagagtgtaaaagacggctccagtgcgatttttatt
ggaaaagtagaagagatacaaaaaaaagtatctaaaaaaggaaatcagtttggtatagta
aatcttatggactttcatggaaatgtcgagattatgcttttctcggataagctcgatgaa
ctaaacgagatgaacctagaagaacctgtggcatttaaaactaaaataacacacacagag
atgtttactcgtataggcgtaagtaagataatgacactaaaagaggcaattaaagagact
aaaaagactaaaaaagaggttagagaagcaccacttgagcctatacatttggcaattaga
ctagatagtgaaacaacaattttagatgagctttatacacttgtccgccaaaatccaggt
aacagagaactaaaacttacgataatttctaagcttcaaaacgttgtgattgactctgcc
ataagagttgacagtaagatattgactgctttagacggcaatctacatgtagatatatta
agttaa
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