Candidatus Sulfurimonas baltica: HUE88_08680
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Entry
HUE88_08680 CDS
T07552
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbal
Candidatus Sulfurimonas baltica
Pathway
sbal03420
Nucleotide excision repair
sbal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUE88_08680
03430 Mismatch repair
HUE88_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbal03400
]
HUE88_08680
Enzymes [BR:
sbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE88_08680
DNA repair and recombination proteins [BR:
sbal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUE88_08680
MMR (mismatch excision repair)
Other MMR factors
HUE88_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOY51205
UniProt:
A0A7S7LTS4
LinkDB
All DBs
Position
complement(1729872..1731956)
Genome browser
AA seq
694 aa
AA seq
DB search
MPLSRLNQEQYAAATSTESQNLIIASAGTGKTSTIVGRIGYLLGTGVKPQEILLLTFTNK
AAAEMVSRVAEYFGKDVASKIDAGTFHAVSYRWLKKQDKKVVLKQQRELKTLFRSVFEKR
SFDHIGAEITPYGGNYLYDLYSFYQNTELENSFDNWVINKYPEHELFAMIYADIVDEFEK
LKKEYGFVNFNDLLLNFRKICKTKDLGYKEVLVDEYQDTNALQGTLIEAIKPPSLFCVGD
YDQSIYAFNGADISIIGSFATKFPNAIVHTLTKNYRSTMPILSLATKVINHNERIYEKKL
EVTRVKESQAPRLLAYDELFDQYHAMAAQIRDSQTPREEIAVIFRNNSSADGIEVGLREL
GIPCKRKGGTSFFDSREVKAVLDFYTLLVNESDMMSFIHIFEFARGIGSAMAKEIYIALK
TLGHGSIFYGLYAPDESMKNPFEKRKLNHQLGLFDDFIELGAVGKFAKLGFEAKFMKNPI
LKHPKLTKDSATFLHDFYLLYRDLKGVKQPRTIVKKIAASSVYKYISEILSSKRAQLKDG
TIDEKQKTESLSKISRKMVLLEELSKPYSEHERFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYVIDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILYLSYAKFDKIKKT
NFVPSQFLYEAGLVPKDEAYRALIEKEMEKEEEK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttgccactatctcgtctgaatcaagagcagtatgctgcagcaacttccacagaatcacaa
aacctaattattgcatccgcaggaacaggtaaaacatccacaattgtaggaagaattgga
taccttctcggcacaggtgttaagccacaagagattttgcttctaacctttacaaacaaa
gctgctgctgagatggtttctcgtgtagcagagtatttcggcaaagacgtagcctctaaa
atagatgcgggaacttttcatgcagttagctacagatggctaaaaaagcaggataaaaag
gttgttttaaagcaacaaagagagttgaaaacactttttagaagcgtatttgaaaagcgt
tcatttgatcatataggcgctgagattaccccttatggaggaaactatctttatgattta
tactctttttatcaaaatacggagttagagaacagttttgataattgggttataaataaa
tatcccgaacatgagctgtttgctatgatatatgcagatatagttgatgagtttgaaaag
ttgaaaaaagagtatggctttgtaaactttaacgacttgcttttgaactttagaaaaata
tgtaaaactaaagatttagggtataaagaggttctcgtagatgaatatcaggatacaaat
gcacttcaggggacgcttatagaggcaataaaaccgccatctcttttttgcgtcggggac
tatgaccaaagtatttatgcttttaacggcgccgatatatcaataatcggctcatttgct
acaaaatttccaaatgccatagtccacacacttacaaaaaattatcgctctacaatgccg
attctttcacttgcaacaaaagttattaatcataacgaaagaatctatgaaaaaaaacta
gaggtaacgagagtgaaagagtcgcaggctccaaggcttttggcttatgatgagcttttt
gaccagtaccacgcaatggcggcacaaataagagacagccagactccaagagaggagata
gcggttatatttagaaataactcctctgcagatgggattgaagttggtctaagggagctt
ggaattccttgtaagagaaaaggggggacaagtttttttgactcacgtgaggttaaagct
gttcttgatttttacactctgcttgtaaatgagtcagatatgatgtcctttatacatata
tttgaatttgcccgcggtataggaagtgcaatggcaaaagagatttatattgcactaaag
actttaggtcacggaagtatattttatggtttatatgcacctgatgaatcaatgaaaaat
ccttttgaaaaacgaaagttaaatcatcaactaggtctttttgatgactttatagaacta
ggagctgttgggaaatttgcaaagcttgggtttgaagcaaagtttatgaaaaatccaatt
ttaaaacatccaaaacttacaaaggactcggcaacattcttgcatgatttttatcttttg
tatcgtgatttaaaaggtgtaaaacaacccagaactatagtgaaaaagatagctgcttct
tcagtttataaatatatatctgaaattttgtccagcaaaagagcacagctcaaagatgga
actattgacgaaaagcaaaaaacggaatctctttctaagataagcagaaagatggttctt
ttagaggaattatcaaaaccgtactctgagcatgagagatttttaaatgcaatgattttg
ggttcatcagatttaacacaaggagagggtgtaaacctactaagtgttcatgcttctaaa
gggttggaatataaagaggtgtatgtaattgatttgatggacggaagatttcctaacaga
aaacttatgcaaagaggcggctcactagatgaagagagacgtctcttttatgttgcagtc
acaagggcaaaggacatactatatctgagctatgcaaaatttgacaaaataaaaaagaca
aactttgtcccatcccagtttttatatgaagcaggactagttccaaaagatgaggcttat
agagctttaattgaaaaagagatggagaaagaggaagagaaatag
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