Candidatus Sulfurimonas baltica: HUE88_12540
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Entry
HUE88_12540 CDS
T07552
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sbal
Candidatus Sulfurimonas baltica
Pathway
sbal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE88_12540 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbal03019
]
HUE88_12540 (recQ)
03400 DNA repair and recombination proteins [BR:
sbal03400
]
HUE88_12540 (recQ)
Enzymes [BR:
sbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE88_12540 (recQ)
Messenger RNA biogenesis [BR:
sbal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUE88_12540 (recQ)
DNA repair and recombination proteins [BR:
sbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUE88_12540 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QOY51908
UniProt:
A0A7S7LV08
LinkDB
All DBs
Position
2496332..2498131
Genome browser
AA seq
599 aa
AA seq
DB search
MRKALNLENKNRVLKDVFGHNSFRELQEDGIDAILQNRDLLMILPTGGGKSLVYQLPTLI
KDGISIVISPLIALMQDQVASLKAQGISADMISSAQTQEDIDNIVYSAKMGQLKFLYLSP
ERLNTQWTLNLLSELKINFFVVDEAHCISQWGHEFRDDYRALGRLKSNFPNSNICAFTAT
STNHVTEDIIRELRLENPLLLKGKIFRKNLYISSQRRITNGQAQLKNFLKRHENESGIIY
VSSRKKAEELSLNLNIAGYKSLAYHAGLPQHIRENNFKIFVNDKVNIMVATIAFGMGIDK
SDIRFVVHMSLPKTQENYYQEIGRAGRDGEDSEVLLLFNSSDMIMQKQFLKDIPDQNYAN
HLDAKIDSIYKYATSEICFHKQLAEYFEDTLDECGSRCDNCSNSDDLRQDITKEAQMVLS
TIYKTNQNFGKNYIIDILRGSTEQKLLSNGADKLSVYNIGSALSKKEWFVVIERLTEMKI
LNLGEFSSLKLTNDAIAILKSQKKVDIKSSRLLVKGQEKKVKRTQEFDYDEELFEKLRTK
RSEIASKMGIPAYLIFGDKTLKHLASDKPFDKASMLEVNGVGEKKFEQFGEEFLNVINS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagctttaaacttggaaaataaaaacagagtcttaaaagacgtatttggtcac
aacagttttagagagctgcaagaagatggtattgacgctattttacaaaaccgtgatttg
cttatgatactgcccaccggcggtggaaaatcacttgtttaccaacttcctacacttata
aaagatggcattagcatagttatatccccactaatcgcacttatgcaagaccaagtagct
tcacttaaagcgcaaggtatcagtgcagatatgatctcatccgctcaaactcaagaggat
atagacaatattgtttactctgccaagatgggtcaactaaagtttttatacctctctcct
gagagattaaacacgcagtggacattaaatcttctgagtgaactaaagataaactttttt
gtagtagatgaagcccactgtatctcccaatggggacatgagtttcgcgatgactacaga
gcattaggaagattaaaatctaattttcccaactctaatatctgcgcatttacagcgact
tctacaaatcatgtaactgaggacatcattagagagctgcgacttgagaatcctcttctt
cttaagggtaaaatttttcgcaaaaacctctacatatcttcgcagagacgcattacgaac
ggtcaagcacaactaaagaactttctcaagcgtcatgaaaacgagagcggaataatttat
gtgagttcaagaaaaaaggccgaggagttaagtttaaatctaaatatagccggctacaag
tcactggcttatcatgccggacttcctcagcatattcgagaaaacaactttaaaatcttt
gtcaatgacaaagtaaatataatggtggcaactattgcttttggaatggggattgacaaa
agcgacattcgttttgtagttcacatgtctctgcctaaaacacaagaaaattactaccaa
gagataggccgtgccggacgtgatggcgaggatagtgaagttttactactctttaactct
tctgacatgataatgcaaaaacaatttttaaaagacataccagaccaaaactatgcaaat
catttagatgcaaaaatagactctatttacaagtatgcaacaagtgagatatgttttcac
aagcaacttgctgagtattttgaagacacacttgatgaatgtggaagtagatgcgacaac
tgctcaaactcagatgatttaaggcaagatattacaaaagaggctcagatggtcttgagc
acaatttataaaactaaccaaaatttcggaaagaactacatcatagatatacttcgcggc
tcaacagaacaaaagcttttaagcaatggtgccgataaactgtcggtatacaatataggg
tctgctctaagtaaaaaagagtggtttgtggttatagagcgcttaacggagatgaaaatt
ttaaaccttggtgaattcagctctcttaaacttacaaatgatgctatagcaatactaaaa
tcgcaaaaaaaagttgatataaaatcttcaaggcttctggtgaagggtcaagagaaaaaa
gtaaaacgtacccaagagtttgattatgatgaagagttgtttgaaaaacttcgaactaaa
agaagtgaaatcgcgtctaaaatgggaattcctgcctacttgatttttggagataagact
ctcaaacatcttgcaagcgataaaccttttgacaaagcgagtatgcttgaagttaatggc
gtaggagaaaaaaagtttgagcagtttggagaagaatttttaaatgttattaactcttaa
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