Sphingobacterium bambusae: SCB77_02010
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Entry
SCB77_02010 CDS
T09645
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCB77_02010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbam03021
]
SCB77_02010
Transcription machinery [BR:
sbam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCB77_02010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
HTH_28
PgaD
Motif
Other DBs
NCBI-ProteinID:
WPL49237
LinkDB
All DBs
Position
481999..482859
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AA seq
286 aa
AA seq
DB search
MRQLKITQSITNRESQSLDKYLHEIGKVDLITAEEEVILAQRIREGDQVALEKLTKTNLR
FVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETKGFKFISYAVWWIRQSILQAIAE
QSRIVRLPLNQVGSLSKISKAFSKLEQEYEREPSPEELADILETTVDKVSDTLSNSGRHV
SMDAPFVQGEENTLLDVLENADPDTDSLLIDESLSEEIKRSLATLTEREREIIVLFFGLG
TNHQLSLEEIGEKFNLTRERVRQIKDKALQRLRHTSRSKILKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctcaaaattacacaatccattaccaatcgcgaatcgcaatcgcttgacaag
tacttgcacgagattggtaaagtagacttaattaccgcggaggaagaagtaatcttggcc
caacgcattcgcgaaggtgaccaagtagctttagagaaattaacaaaaaccaacttacgt
ttcgttgtttctgttgcaaaacaatatcagaatcaaggactcaccttaggtgacctgatc
aacgagggcaatttaggcttgataaaagcagcaaagcgttttgatgaaactaagggtttc
aagtttatttcttatgccgtatggtggattcgtcagtctattttgcaggcgattgctgaa
cagtcacgtatcgtgcgtctacctttaaatcaggtaggttcattgagcaagattagtaag
gcgttctccaaattggaacaggaatacgagcgcgaaccttctccagaggaattggcagac
attttggaaaccaccgttgataaggtttccgacacgttgagcaactcaggaagacatgta
tcgatggatgccccttttgtacagggcgaagaaaacaccctcttggatgttttggaaaat
gcagatcccgataccgatagcctattgatcgacgaatcattgtcggaagagatcaaacgt
tcgttggctacattgacagaaagagaacgcgagattatcgtactctttttcggactaggt
accaaccaccagttgtctttggaagaaattggcgaaaagttcaaccttacaagggaacgc
gtgcgccaaatcaaagacaaagcgctacagcgcttacgccatacttcgcgcagtaaaatt
ttaaaatcttatttgggctag
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