Sphingobacterium bambusae: SCB77_02290
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Entry
SCB77_02290 CDS
T09645
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00730
Thiamine metabolism
sbam01100
Metabolic pathways
sbam01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SCB77_02290 (thiC)
Enzymes [BR:
sbam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SCB77_02290 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WPL49287
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Position
538135..539955
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AA seq
606 aa
AA seq
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MDQQTQQLSTAPFPKSRKVYVQGQQFPIRVAMREISLDKTRLSNGQLEENSPVTVYDTSG
PYSDPSVEIDIRKGLPRIREQWILDRSDVDQLKAVSSTYGHERLHNKSLDHLRFDYQHSP
KRAKSGHNVSQLYYAKQGIVTAEMEYVAIRENQRIQESSLAEDPLAVQHPGHSFGANTPK
NYITAEFVRQEIAAGRAIIPNNINHPESEPMIIGRNFLVKINANIGNSAVTSSIEEEVEK
AVWACRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGIAENLTWEIF
RDTLIEQAEQGVSYFTIHAGVLLRYIHLTAKRVTGIVSRGGSIMAKWCLFHHQENFLYTH
FEEICAIMKQYDVAFSLGDGLRPGAIADANDAAQFAELETLGELTKIAWKHDVQVMIEGP
GHVPMHLIKENMEKQLETCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGCAMLCY
VTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARFEFRWEDQFNL
SLDPDTAREFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEIRDSVAEGLQEKSAEFIQS
GKEIYL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcaaacacaacaactttccacggccccttttcccaaatcacgcaaagtgtac
gtacagggccagcaatttcccattcgcgtcgccatgcgcgagatcagtctcgataaaaca
cgattgagcaatgggcagctggaagagaacagccccgtgacggtgtatgacacctcagga
ccatacagtgaccccagtgtcgaaatcgatatccgcaagggactgccgcgcatccgcgag
cagtggatccttgatcgcagcgatgtcgatcaactcaaagccgtaagctctacctatggc
cacgaacgactgcataacaaaagccttgatcacctgcgtttcgactatcagcatagcccc
aaacgggcaaaatcaggacataatgttagtcagctttactatgccaagcaaggtattgtt
actgcagaaatggaatatgtggcgatacgcgaaaatcaacgtatccaagagagcagctta
gccgaagatccgctggcggtgcagcatccgggccatagcttcggcgccaacacgcctaaa
aattatattaccgcagaatttgtacggcaagagattgccgcagggcgagccatcattccc
aacaacatcaatcacccggaaagcgagcccatgattatcggtcgcaatttcctagtcaag
atcaatgccaacatcggcaatagcgccgttacttcgagcatcgaggaagaagtagaaaaa
gccgtgtgggcctgccgctggggagccgataccattatggatctatccactggaaagaac
atccatgaaacgcgggaatggatactgcgcaactcgccggttcctatcggcacagtgccc
atctaccaggcgctggaaaaagtcaacggcattgccgaaaaccttacttgggaaatcttc
cgcgatacccttattgagcaagccgagcagggcgtctcctacttcacgatccatgccggc
gtactgctgcgctacatacacctcaccgccaaacgcgtgacaggtattgtgtcgcgcgga
ggatccatcatggccaaatggtgtctttttcaccaccaagaaaatttcctatacacccat
ttcgaagagatatgcgcgatcatgaaacaatatgacgtcgccttttctttgggcgacggg
ctgcgtcccggcgcaatagccgacgccaacgatgcggcacagtttgccgagctggaaacc
ttgggcgagctaaccaagatcgcctggaagcacgatgtgcaggtgatgatcgaaggcccc
ggacatgtgcccatgcacctcatcaaagaaaatatggagaagcagctggaaacctgcgat
gaagctcctttctacacgctgggtccactaaccacggatatcgcccccggctacgaccac
atcacctcggccattggcgctgccatgatcggctggtatggctgtgccatgctctgctat
gtaacgccaaaagagcatttgggacttcccaataagaaagacgtgaaggacggcgttatt
acctataaaatagcggcccatgctgccgatctggccaaaggccatcccggcgcacaatac
cgcgacaatgccctcagtaaagcacgattcgaatttcgatgggaagatcaattcaaccta
tcgttggatccggacacggcacgcgagtttcacgatgagacactacctgcagaaggcgcg
aaaattgcccacttctgctccatgtgcggaccaaaattctgctcgatgaaaattacccaa
gagatccgcgacagcgtcgcggagggattgcaagaaaaatcggctgaatttatccaaagc
ggcaaagaaatatacctgtag
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