Sphingobacterium bambusae: SCB77_03375
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Entry
SCB77_03375 CDS
T09645
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbam02000
]
SCB77_03375
Transporters [BR:
sbam02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SCB77_03375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
WPL49491
LinkDB
All DBs
Position
complement(788592..790529)
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AA seq
645 aa
AA seq
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MFFKDNNSGSPFCRVAVRFLWFFLTVLASSCGNYLDVTPENVGTIDYAFRNRNEAEKYLF
ACYNTLQGLNTQINDPGFITSGEVYNNSYADNLAATNFLILSGTQNTNSPILNYWEGTAG
GINLFQGIRRCNIMLENIQKPIDLSDTERERWISEVKFLKAYYHYILLKMYGPIPIMDNA
DDISESLEVYRKKRVHADIVFSYITNLLDESIPSLPVLISNTSQELGRITRSIALGVKAE
VLALQASPLFNGNPDYSSFRDQQGEALFAETQDISKWRNAAKAAKEAIDHARAQGHELYD
LIIPAAIPLEINDSLKRLLTLQQAITEKWDLNKEVIWALNGTVGYQENYIPRLASVRGNS
HGNVGVPLAVAELYYTQNGVPLEEDNTFDYNQRYNLKIADRVDRFYIRENYTTVSANFNR
EPRYYASIGFDGGAWYGGGVLDPNAMLYVQARKGGNSGVLEYGRANLTGFWPKKLVNFLT
SIDPNSGNVTINNYRMPRLRLSDLYLLYAECLNESEGPSTEVYDYIDRVRARAGLKGVVQ
SWTKYSSLPNKPQTKEGLRDIIHRERRVELMFEGKSGWDLRRWKEYVNEVSKPIQGWNVN
QEEIRAYYTVQTYLIPALTNKDYFWPVSISELLRNNNLVQSPIWR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttttttaaagataataatagcggtagcccattttgccgtgttgccgttagatttctg
tggttttttctaacggttttagcaagttcctgcggcaattatttagatgtcacgcctgaa
aatgttggaaccatcgactatgcgttccgaaacagaaacgaagcggagaaatatttattt
gcttgttacaatacgttgcaaggattgaatactcaaatcaatgatccggggtttattaca
tcgggagaagtttacaataatagctatgctgataatttagcggcaactaatttcttgatc
ctaagtgggactcaaaataccaattctccaattttaaactattgggaagggactgctggt
ggaataaatttatttcaagggattaggcgctgtaatatcatgttagaaaatattcaaaaa
ccaatcgatcttagtgatacggaaagagagagatggatttcagaggtaaaatttttgaaa
gcttattatcattatattctcttgaaaatgtatgggcccattccaattatggacaatgct
gatgacattagtgaatctttagaggtataccgaaaaaagcgtgtgcatgcagatatagtt
ttttcttatatcacaaacttactggatgaatctattccctctttgccggtgttaatatct
aatacctcacaggagctcgggagaatcacaagatcaatcgctctaggagtaaaagcagaa
gtgttggctttacaagctagccccttatttaatggcaaccccgactatagttcttttaga
gatcaacagggcgaagcactatttgcagaaacgcaggatatatcgaaatggcgaaatgcc
gcaaaagccgctaaagaagcgatcgatcatgcacgagctcaaggacatgaattatatgat
ttaataattccagcagcaatacctttagaaatcaatgactctcttaaaaggctgcttacc
ttacaacaagcaataacggagaaatgggatttaaataaagaggtcatttgggctttgaat
ggcactgttggttatcaagagaactatattcctcgacttgcatctgttcgtggaaatagt
catggaaatgttggtgtgcctttagccgtcgctgaactgtactatacgcagaacggcgta
cctctggaagaggataatacatttgattataaccagcgttacaatctcaagattgctgat
cgtgttgataggttttatattcgtgagaattacaccacagttagtgctaacttcaaccgc
gaaccacgatattacgccagcattggttttgatggtggagcgtggtatggtggcggtgtg
ctagatccgaatgctatgttgtacgtacaggctagaaaaggtggaaatagtggggtgcta
gaatatggaagagccaacctaaccggcttctggcctaaaaagttggtgaattttcttact
tccattgatccgaatagtggcaatgtgactattaataactaccggatgccgcgacttaga
ttgtcagacttatatctgttgtatgctgaatgcttaaatgaaagcgagggaccgtctaca
gaagtttacgattatattgaccgtgtacgagctcgtgcagggctaaagggagttgttcaa
tcttggacgaaatactcttctttaccaaacaaaccccaaaccaaggaaggtttacgtgat
atcatccaccgtgaacgaagagtcgaacttatgtttgagggcaaaagtggctgggatctt
cgtcgatggaaggagtatgtcaacgaagtctcaaagcctattcaaggttggaatgttaac
caagaagaaattagggcatattatacggtgcaaacttatttgattcctgcgttaaccaat
aaagattatttttggcctgtttcaataagtgagttacttcgaaataacaatttggttcag
tcccccatttggcgctga
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