Sphingobacterium bambusae: SCB77_04885
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Entry
SCB77_04885 CDS
T09645
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00550
Peptidoglycan biosynthesis
sbam01100
Metabolic pathways
sbam01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCB77_04885 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCB77_04885 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbam01011
]
SCB77_04885 (mrdA)
Enzymes [BR:
sbam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SCB77_04885 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbam01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCB77_04885 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
CoV_E
Motif
Other DBs
NCBI-ProteinID:
WPL49788
LinkDB
All DBs
Position
1152910..1154874
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AA seq
654 aa
AA seq
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MNSFFARKFVIQGIFIAVALVIVIRLFYIQIIDESYLLSANNNVLRKVVVYPARGVVFDR
NGKVLVQNEPVYDLLVTPREAKEIDTALLCRIIDIDLKGFKTRMDKAREHSPYRASIFEK
QLSSATYAQLQEHLYKFRGFYVQNRTVRSYPDSIAPQLLGYIQEVNEKDIKNSDGFYRSG
DYIGGSGIERSYEDLLRGQRGVKNQMVDALNRPKGVFMEGRYDTLAVSGEGLISTIDRDL
QLLAEKLMKGKMGSVVAIEPATGEILTFVSAPSYDPNMMVGRQRGNNYMKLLNDETKPMF
IRPIQAQYPPGSVFKVVAALTAQQAGIINQQTVFNCPGGYRYGGGRAIMRCTHVHGATDL
ANSIMGSCNTYYGYTYARMIDSRGMSGPQAYDMWREGLLKFGLGQRLGIDLPGERPGLVP
TSDFYTKRYGSGKWRSGYNISLSIGQGELGITPLQMANIMAIVANKGFYYRPHLVKGIGE
KKIVKEEFTEKISAGVDEKYYAPVIEGMSRAVNRPGGTAYSVRIPTIEMCGKTGTAQNPH
GENHAVFFAFAPRENPKIAIAVFVENAGYGGTWAGPIANMLVEKYINDTITLPKYIQDRI
YNANFIPKSEKKTEVKKDTTTKKGAASQAVKTTKSTAPKKEYFVHHSQVRSRYE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttttttcgcacgtaaatttgtcattcaaggaatatttattgccgtggcgctg
gtcattgtgatacgtctgttttatattcagattattgacgaatcgtatttattatcagcc
aacaacaatgtgcttcgaaaagtcgtcgtgtaccccgctcgcggagtcgtttttgacaga
aatggaaaagttttggtacaaaatgaacccgtttacgacctgcttgtcaccccgcgcgaa
gcgaaggaaatcgatacagcattactttgccgaattatcgatatagacctaaaaggattt
aaaacgcgcatggacaaagcgcgcgaacattctccctatcgggcatcgatcttcgaaaaa
cagctttcttcggctacatatgcccaactacaggaacacctgtataaatttcgaggcttc
tatgtacagaatagaaccgtaagaagttatccagacagcatcgcgccgcaactgttgggc
tatatccaagaggtaaacgaaaaggacattaaaaattccgatgggttttaccgctccggt
gactacatcggaggaagtggtatagaacgctcctacgaagatcttctacgcggtcaacgt
ggtgtaaaaaaccaaatggtcgatgcgctgaaccggccgaagggtgttttcatggaaggt
cgttatgataccttagccgtttctggcgagggattgatctctaccattgaccgagacctg
cagctattggctgaaaaactgatgaagggaaagatgggttctgtcgtcgccattgagccc
gcaactggtgaaatattaacatttgttagtgccccttcctatgatccaaatatgatggtt
ggtagacagcgaggcaataattacatgaaattactgaacgacgaaactaagcccatgttt
atccgccctatccaagcgcaatatccccctgggtcggtatttaaggtcgttgcagcactt
acagcacaacaagcgggcatcatcaaccagcaaacagtattcaattgcccgggaggctac
cgctatggcggtgggcgcgccattatgcgctgcacccacgtacacggagcaacagatctg
gccaattccattatgggctcctgcaatacctactatggatacacctatgcacgcatgata
gattccagaggaatgtcgggaccacaagcctacgatatgtggcgtgaaggtttactgaaa
tttggactgggacaacggttggggattgaccttccgggagaacgccccggactagtgccc
acttcagacttttacaccaaacgttacggtagcggtaaatggcgctctggatacaatatc
tctctttctatcggacagggggagctcggtatcacgccattgcagatggctaatatcatg
gcgattgtggccaacaaaggcttctactaccgtccgcaccttgttaaaggaatcggggaa
aagaaaattgttaaagaggaatttactgaaaagatcagtgccggcgtagacgagaaatat
tatgcgcccgtaatcgaaggaatgagccgcgcagtgaaccgacctggaggaacggcctac
agcgtgcgcatccctactatcgagatgtgcggaaagacaggaaccgcccaaaacccccac
ggggaaaaccatgccgtattctttgcctttgcaccacgagaaaacccgaagattgccatc
gccgtattcgtggaaaacgcgggttacggaggcacctgggccggtcctattgctaatatg
ctcgtggagaaatatataaacgataccattacgcttcctaaatacatacaggatagaata
tacaatgccaactttatcccgaaatcggaaaagaaaacagaggtaaaaaaagatacaaca
acaaaaaaaggtgcagcgagccaagccgtaaaaacgacaaagtcgaccgcccctaaaaaa
gaatattttgtgcaccatagtcaagtgagaagccgttatgaataa
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