Sphingobacterium bambusae: SCB77_05045
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Entry
SCB77_05045 CDS
T09645
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbam03400
]
SCB77_05045 (sbcD)
DNA repair and recombination proteins [BR:
sbam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCB77_05045 (sbcD)
Archaeal homologous recombinant proteins
SCB77_05045 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WPL49820
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All DBs
Position
1183989..1185215
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AA seq
408 aa
AA seq
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MKILHTADWHLGKKLDYFSRLEEQREVLAEISEIAEREQVDAIIIAGDLFDTFNPPVEAV
ELLYKTLRRLSNNGERPVIAIAGNHDSADRIDAPDALARECGIIFVGYPKARVVPFEVQH
GYALSKTDDGFIELLLPRHNYPLRIIHTPFANELRLKQFLGLESKEQKLNELLHEHWQTV
ADAYCDEQGVNMLTAHLYMLRRGGEILEEPEGEKPIKVGHADLIYSDGIPRQIQYTALGH
LHRFQEIGGHPAPVVYPSSPLAYSFAEAGQEKGVVIIDAKPAQPVTYAKIPLKSGRALHR
KKFLHIDEAVAWLHANPYALIELTLVSNTFLSSAELKRIHEAHDGIIHIIPVVKSEEMIE
EKVQSINLDQDIDALFKDYFQYRLGQEPNHEIMQLLNEVINSNTETED
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattacatacggcagattggcacctcggaaaaaaactggattatttctcccgc
ttggaggaacagcgcgaggtgcttgccgagattagtgaaatagccgagcgcgagcaagtc
gatgctatcattatcgcgggcgatctttttgacacgttcaatccgccagtggaggccgta
gagctgctctataaaacactgcgccggctgagcaataatggcgagcgtcccgttatcgcc
attgcgggcaaccacgatagcgccgatcgcattgacgcccctgatgctctggcccgcgaa
tgcggaatcatcttcgttggataccccaaggcgcgggtcgtcccatttgaggtacagcat
ggctatgccctgtccaaaaccgatgatgggtttatcgagctactcctacctcgccataat
tatccactccgcattatccacacgcctttcgccaatgaattgcgcttaaaacagtttctt
ggactggaaagcaaagaacaaaaactcaatgaattgctgcacgagcactggcaaactgtt
gccgatgcctattgtgatgaacaaggggtaaacatgctcaccgcacacctttacatgctt
agacgtggaggcgaaatactggaagaacccgaaggggaaaaacccatcaaagtgggacac
gccgatctgatctattccgacggtattcctaggcagatacagtataccgcactgggacac
ctccaccgatttcaggaaattggcgggcatccggcgcctgttgtttatcccagcagccca
ctagcctattcctttgccgaagccggacaggaaaaaggggttgtcattatcgacgcgaag
cctgcacaacccgtcacctacgctaaaatacccttgaagagtggccgcgcactgcaccga
aagaagttcctgcatatcgatgaagctgtggcttggctgcatgccaatccctatgccttg
atagaactgaccttggtcagcaacacttttctaagctctgctgagctaaaacgcatacac
gaagcccacgatggcatcattcatatcatcccggtcgtcaaatccgaggaaatgatagaa
gaaaaagtacaatctatcaacctcgaccaggatatagatgccttatttaaggattatttt
caatatcgcctcggacaagagcccaaccatgaaatcatgcagctactcaacgaagtgata
aacagcaacacagaaacggaggactaa
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