Sphingobacterium bambusae: SCB77_06400
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Entry
SCB77_06400 CDS
T09645
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00061
Fatty acid biosynthesis
sbam00071
Fatty acid degradation
sbam01100
Metabolic pathways
sbam01212
Fatty acid metabolism
sbam02024
Quorum sensing
sbam04146
Peroxisome
Module
sbam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SCB77_06400
00071 Fatty acid degradation
SCB77_06400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SCB77_06400
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCB77_06400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbam01004
]
SCB77_06400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbam04147
]
SCB77_06400
Enzymes [BR:
sbam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SCB77_06400
Lipid biosynthesis proteins [BR:
sbam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SCB77_06400
Exosome [BR:
sbam04147
]
Exosomal proteins
Exosomal proteins of breast milk
SCB77_06400
Exosomal proteins of breast cancer cells
SCB77_06400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Jiraiya
Motif
Other DBs
NCBI-ProteinID:
WPL50078
LinkDB
All DBs
Position
complement(1495855..1497621)
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AA seq
588 aa
AA seq
DB search
MSEPRRIFDLAYRQLELYPELPMFAVKQEGEWKKISTAAFLAQTLALSKGLLALGVKAGD
RVGLISESRYEWHVIDFAIQQLGAVTVAMYPNITDADYQFIFNDAEIRICIVSDKSLYQR
ICNLKDGIYALHYIFAINEFADSRNWKALIEIGQELADEQVQLLRDRVQWDDLATLVYTS
GTTGKPKGVMLTHGNILSSVFAAREVTPLNAYTRALTFLPPCHAYERMVIYTYFYIGISV
HIAEGLEHIATNIKEVKPHIMTAVPRIMEKVFENIMKTGSTLTGIKRKIFDWAIAVASDF
DPTGADNGLLYRQKLRLARRLVLDKFHEALGGELVTVVSGSASLQSRIIRVLLAARIPIF
EGYGLTEASPLISVNFFDRGIRVGTVGNAVKDVEIKLADDGEILVKGPNIMQGYYKNPEA
TAEVLKDGWLYTGDVGKWVDGSFLKIIDRKKEMFKISGGKYIVPQPIETKLVESPFIEQA
MVVGDSMKYAAALIVPHYGNLKDWAQVNEPALLALPKEQFLTSSAIHKRVNQDVKKANQH
FGNWEQIKKIAILPAEFSIERGELTPTLKMKRKEILKHYQKEYEEMFN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccacgcagaatttttgatttggcttatcggcaactggagctctacccagag
ctacctatgttcgcggtaaagcaggaaggagaatggaaaaagataagtactgcagcgttt
ttagcgcaaacgcttgccctttcgaagggattgcttgctttgggtgttaaagcgggtgat
cgggtcgggttgatttccgagagccggtatgagtggcatgtgatcgattttgctattcag
caactcggtgcggtcacggtagccatgtatcccaatattacggatgcggactatcaattt
atcttcaacgatgctgagatacggatctgtattgtcagcgataaatcgttgtaccagcgg
atatgtaatttgaaagacggcatttacgcgttgcattatatttttgccatcaacgaattt
gcagattcccgaaattggaaagccctgattgaaataggacaggagcttgctgatgagcag
gtgcagcttcttcgtgatcgggtgcagtgggatgatttagcaactttagtttatacctcg
ggcacaaccgggaagccaaagggtgtcatgctcacacatggcaatatactcagcagtgtt
tttgctgcacgagaagtaacacccttaaatgcttatacgcgagcgctcacctttttacct
ccctgccatgcatatgaacgtatggttatctacacctacttttatataggcatcagcgtg
catattgccgaaggattggagcacattgcgactaatattaaagaggtgaagccacatatt
atgacggctgtgccgcgtattatggagaaggtttttgaaaatatcatgaaaacgggatcc
accttgacgggcataaagcgaaagattttcgattgggcgattgcggtggctagcgatttt
gatcctaccggggccgataatggtctactgtatagacagaagctacgcttagcgcggcga
ttggttttggataaatttcatgaagccttgggcggcgagttggtgaccgtcgtgtcggga
agtgcttcgctgcaatccagaattatccgcgtattgttggcagcacgtattccgatcttt
gaaggttatggattgacggaagcatcgcccttgatctcggttaatttttttgatcgaggt
atacgcgttgggacagtggggaatgctgttaaggatgtcgagatcaagctggctgacgac
ggcgagattttggtgaagggtcccaatattatgcagggctactacaaaaatccggaagca
acagcggaggtgttgaaagacggttggctctatacgggagatgtgggcaaatgggtggat
ggtagttttctgaaaatcatcgatcgcaagaaggaaatgttcaagatttcgggtggtaag
tatattgtgccgcagcctattgaaaccaagctggtagaatctccgttcattgaacaggcg
atggtggtgggcgatagtatgaaatatgccgcggccttgattgttccccattatgggaac
cttaaagactgggcacaagtgaacgagcctgccttgttggcgcttcccaaagaacagttt
ttgacaagctcagccatccacaagcgtgttaatcaagacgtcaaaaaggcaaatcaacac
ttcggaaactgggagcagattaagaagattgctatcctacctgctgagtttagtatagaa
cgtggcgaattaacgccgactctcaaaatgaaacgcaaagaaatcttaaagcattatcag
aaagagtatgaagagatgtttaattaa
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