Sphingobacterium bambusae: SCB77_07640
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Entry
SCB77_07640 CDS
T09645
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam02024
Quorum sensing
sbam03060
Protein export
sbam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SCB77_07640 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCB77_07640 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCB77_07640 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbam02044
]
SCB77_07640 (ffh)
Enzymes [BR:
sbam01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SCB77_07640 (ffh)
Secretion system [BR:
sbam02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SCB77_07640 (ffh)
Eukaryotic Sec-SRP protein
SCB77_07640 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
cobW
AAA_33
APS_kinase
AAA_22
MMR_HSR1
CLP1_P
AAA_17
ATPase
AAA_18
nSTAND3
AAA_30
AAA_24
KTI12
AAA_31
6PF2K
AAA_16
KAP_NTPase
ResIII
DO-GTPase1
SLFN-g3_helicase
NACHT
ABC_tran
TsaE
Thymidylate_kin
ArsA_ATPase
NPHP3_N
TctA
Seryl_tRNA_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
WPL50319
LinkDB
All DBs
Position
complement(1780526..1781869)
Genome browser
AA seq
447 aa
AA seq
DB search
MFQNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKTFTDDVKQKAL
GENVLTSISPGQLLTKIMNDELTALMGGSVTELDTAKNPTVILIAGLNGAGKTTFSGKLA
NYLREKKGKKPLLVAGDVYRPAAVDQLQVLGSQVNVPVYVNRESTDPVAIAREGVEEAKR
NGHNVVIVDTAGRLAIDEALMQEISAVKDATQPHEILFVVDSMTGQDAVNTAKAFNDRLD
FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDVV
SLVERAQQQFDEKQAAELQKKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAIK
DVEIDDNAFKPIEAIIDSMTPFERENPDAIDTKRRMRIAKGSGTDINEVNKLMKQFADMR
KVMKQMSNPGMAAKMMRNMPKMPGNSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaatttacaggataaactggatagggcctttaaagtattaaagggacaagga
agtatcactgaaataaacgtcgcagagacgatgaaggagattcgcaaggccttactcgat
gccgatgtgaattataaaacagcaaaaacgtttaccgatgacgtaaagcaaaaggccttg
ggcgagaacgtattgacaagtatctctccgggtcagttgttgacgaagatcatgaacgat
gaacttaccgccttaatggggggctccgttacggagctggatacagcaaagaacccaacc
gtaattttaatagccggtttaaacggtgcgggtaaaacgactttttccggtaagttggca
aactacctacgcgagaagaaaggcaagaaaccactattggttgcgggcgacgtttatcgt
cctgctgcggtggatcagttgcaggttttgggaagtcaggtgaacgttccggtttacgtt
aatcgggaatctactgatccggtagcgattgcccgtgaaggcgtggaagaagcaaagcgg
aatggacataatgtcgttatcgtcgataccgctggtcgtttagcgatcgatgaagctttg
atgcaggaaatttctgctgttaaagatgcaacgcaaccgcatgagattctctttgttgtg
gattccatgaccggtcaagatgcggtgaacacagcaaaagcatttaatgaccgcttggac
tttacaggagttgtgttgaccaaattggatggtgatacacgcggtggtgcagccttgtcc
atcaagtccgtggttaacaagccgatcaaatttatcggtaccggcgaaaaaatggaggcg
ttggatgttttctatccagatcgtatggcttcgcgtattctcggtatgggtgacgtcgtt
tccttggtggagcgcgcgcagcagcagtttgacgaaaaacaggctgccgagctacaaaag
aagattcgcaagaataagtttgattttaacgattttaagagccagatacagcagatcaag
aaaatgggtaacatgaaggatctgatgggtatgatcccgggtgttggtaaagcgataaag
gatgtcgaaattgacgacaacgcctttaaacctatcgaagccattatcgattcgatgact
ccatttgagcgcgaaaatccggatgctatcgataccaagagacgcatgcgtatcgctaaa
ggatcaggtacggatattaatgaggtgaacaagctgatgaagcaatttgcagatatgcgt
aaagtcatgaagcaaatgtccaatccggggatggctgcaaaaatgatgcgcaacatgcct
aagatgccgggcaattccttctag
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