Sphingobacterium bambusae: SCB77_08060
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Entry
SCB77_08060 CDS
T09645
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCB77_08060 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbam03400
]
SCB77_08060 (mutS)
DNA repair and recombination proteins [BR:
sbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SCB77_08060 (mutS)
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPL50401
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Position
complement(1871425..1874001)
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AA seq
858 aa
AA seq
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MQQYNTIKAKYPGALLLFRVGDFYETFGEDAIKAAGILGIVLTKRGNGSESETALAGFPH
HSLETYLPKLVRAGQRVAICDQLEDPKQTKTIVKRGVTELVTPGVSYNDNIVQQKSNNYL
ASICEEKGQYGISFLDISTGEFLVAQGSASYIDKLLQGFKPTEIILAKKQYKAFLEQFGS
QYYTYTLDEWPYTGDYASETLLKHFEVRSMKGFGIERMPLGMLAAGVALHYLNETEHRNL
QHVSHIARIEEDRFMWLDRFTIRNLELIGSANENATTLSDVLDQTASPMGARLLKRWMVM
PLKDLKSINERLDVVSYFYEHRDLRDELIKEIKQVGDLERLISKIGLQKANPREITQLKR
SLYAVEKLKTLTNIPSSESLRVISEQLNICQIIRDKMEGMLQAEPPVSILKGNVIADGVD
ADLDKLRKVAFGGKDYLLEIQRRESEATGIPSLKIAFNNVFGYYLEVTNTHKDKVPTEWI
RKQTLVNAERYITEELKEYEEQILGAEEKIQAIESRIYAELLLDITNYIKPIQLNAQLIA
KLDVLLNFAWIAEKNFYVKPVVTEDKLLDIKGGRHPVIEKNLPLGEDYITNDTFLDPESQ
QIIIITGPNMAGKSALLRQTGLIVLMAQIGCFVPAKEATIGLVDKIFTRVGASDNLSSGE
STFMVEMNETASIMNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEFLHNHPTARAKTLF
ATHYHELNELTNSMSRIKNFNVTVKELNNKVIFLRKLVPGGSEHSFGIHVAKLAGMPAKL
IGRAGEILKRLEQERTGGEQIKDSMRKIQKQAYQLQMFAIDDPVLEKIRDMLNNLDVNTL
TPVEALMKLDEIQRLLKN
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatataataccatcaaggccaagtaccctggcgctttgctgttgtttagagtg
ggggatttttacgagacatttggagaagatgcgattaaagctgctggtattttgggtata
gtattaacgaaaagaggcaatggatcagaatccgagaccgcattggccggttttccgcac
cattctctagagacctatttgcccaaactcgttcgcgcgggccaaagggttgccatatgt
gatcagttggaagatcctaagcaaacaaaaacaatcgtcaaacgtggggtaacggaactt
gttacgccaggcgtatcgtacaacgataatattgtccaacaaaagtccaacaactatcta
gcctctatctgtgaagaaaaaggtcaatacggcatttcttttctggacatctctacgggc
gaatttctggttgcacagggcagcgcaagttatatagataagcttttacagggctttaaa
cctacggagatcatcttagcaaaaaaacaatacaaagcatttttagaacaatttggaagc
cagtattacacttatacgctggacgaatggccatataccggtgattacgcatcggaaaca
ttgttgaagcatttcgaagtgaggtcgatgaaaggtttcggtatcgagcgcatgccacta
gggatgcttgctgccggagtagccttgcactacctcaatgaaaccgagcatcgtaatcta
cagcatgtctcgcatatcgctcgaattgaggaagaccggtttatgtggttggatcgcttt
accatccgtaatttagaattgatcggctcggcaaacgaaaatgcgaccaccctttccgac
gtcttggatcaaacggcttcccccatgggtgctcgcttgttgaagaggtggatggtgatg
cccctcaaagatttgaagtctatcaacgaacgcttagatgttgtttcctatttttatgaa
catcgtgatctgcgtgatgaacttatcaaagagataaaacaagtgggcgatctggaacgc
cttatttctaaaataggcttgcagaaagcgaatccacgtgaaataacacagttgaagcga
tcattatatgctgtagaaaaactgaaaaccttgactaatatcccgtcttcggaaagtttg
cgtgttatctctgaacaactgaatatttgccagattatccgagataagatggaaggcatg
cttcaggcagaaccaccggtgtcgatcctgaagggaaatgtcattgcggatggtgtcgat
gcagatttggataaattacgcaaggtagcctttggcggaaaagactatctgttggaaata
cagcgacgagaatcggaagccactggcattccctcgttgaagattgcattcaacaatgtc
ttcggctactacctcgaggtaacaaatacacacaaggataaagttcccacggaatggata
cgaaaacaaaccttagtcaatgcggaacgatatatcaccgaagagctcaaggaatatgaa
gagcagattctaggcgccgaagagaaaattcaagccatagaaagccggatatatgccgag
ctgcttttggatatcacgaactacatcaagcccatacagcttaatgcgcaacttattgcc
aagctagatgtactgctgaacttcgcttggattgccgagaaaaacttttatgtcaaacct
gtggtcacggaggacaaattgctagacatcaaaggtggtcgccatcctgttattgaaaag
aatttgccgctcggggaggattatatcactaacgacacttttctggatccagagagccag
cagattattattattaccggtccaaacatggccggtaagtcggccttgttgcggcagaca
ggcttgatcgtgctcatggcacagataggctgctttgtcccggcaaaagaagcgaccata
ggtttagtcgacaaaatttttacgcgggtgggagcctccgacaacttgtcttcgggcgag
tcgacctttatggtggagatgaacgagactgccagcatcatgaataatctttccgatcgt
tcgttaatcctactggatgaaattggtcgcggcacgagtacctatgatggtatctctatt
gcgtgggctattgccgaatttttacataatcatcctaccgcgagggcgaaaacacttttt
gctacgcattatcacgagttaaatgaattgacgaactctatgtcgcgtatcaaaaatttt
aatgtcacggtgaaggaactgaacaataaggtcatctttttacgcaaattggtgccaggt
ggttccgagcatagcttcggtatacatgtggctaaattggcgggtatgccggccaaattg
atcggtcgagcaggggaaatcctgaaacgactggagcaggaacgtaccggtggagaacag
ataaaagatagtatgcgtaagatccaaaagcaggcttaccagttacagatgttcgctatt
gatgatcctgttttggaaaaaattcgcgatatgctcaacaacttggatgtgaataccctc
acgccagtagaagccttgatgaaacttgacgagatacagcgcctattgaagaactaa
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