Sphingobacterium bambusae: SCB77_08560
Help
Entry
SCB77_08560 CDS
T09645
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00052
Galactose metabolism
sbam00511
Other glycan degradation
sbam00600
Sphingolipid metabolism
sbam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SCB77_08560
09103 Lipid metabolism
00600 Sphingolipid metabolism
SCB77_08560
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SCB77_08560
Enzymes [BR:
sbam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SCB77_08560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
F5_F8_type_C
LacZ_4
Glyco_hydro_2
F5_F8_type_C_2
Glyco_hydro_2_N2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
WPL50497
LinkDB
All DBs
Position
complement(2000147..2004199)
Genome browser
AA seq
1350 aa
AA seq
DB search
MMTNTITSACKIVWFFMFPLLLLGQSRPAVDSIPGFAYGEQAHPSGKEWESPEALSLNKE
LPHAYHFSFKKVESARAVLPEYSEYWRSLDGTWKFHWAKTPTERPQDFYRSDFNAAAWDD
VPVPMSWNILGIQKDGTLKYGVPIYVNQPVIFQHQVKVDDWRGGVMRTPPQHWTTYIDRN
EVGSYRRSFSVPADWKDKEVYINFDGVDSFFYLWINGKYVGFSKNSRNLASFNISKYLRA
KGENIVAVEVYRNSDASFLEAQDMFRLPGIFRTVSISAKPKVQIRNLVAIPDLDSAYKQA
SLQVTAEVTNQAGQDVAGYAIRYSLYANKLYSDEGVKVDAINLRRSIGTVQKGATAVVDQ
ALKVDNPQKWSAENPYRYTLIAELLDRKGKVVDVVSSYIGFRKVEIKDTPAQQDEFGLAG
RYFYVNGKPVKLKGVNRHETNPEKGKVISRKQMEEEVKLMKRANINHVRNSHYPDDPYWY
YLCDKYGIYLEDEANLESHEYYYGEASLSHPPEWKNAHVARNLEMVHATINHPAIVIWSL
GNEAGPGKNFVAAYEAIKKVDVSRPVQYERNNSIVDMGSNQYPSIDWVREAVKGKYRLKY
PFHISEYAHSMGNATGNLIDYWEAIESTNFFMGGAIWDWIDQSMYAYDKTTGERYVAYGG
DFGDKPNDGTFVMNGLVFSDLTPKPAYFEVRKVYQNVAVRAVDMQMGTVEIFNKNYFNSL
DDYDVLWSLWKDGVEIERKATFKGDVTNIAARTGRQVSIPYDFSSLDPQSEYFVKVQFLL
KEDRPWAAAGEVQMEEQLLVKTADMWPSIVSVAKGEAIQINGEAGLKVLKGKDFVVKFDD
ATGSIYQLVYGGNILIRDGEGPRLDALRAPLDNDNWAYQQWFEKGLHQLKHRALQANAYP
RADGAYVLSYTVESQAAHGATIRGGSSGTYTLDEHQDVPFNKSDFKFTSNYIWTVYPDGS
IELQSSITSNNSSLILPHLGFAMQIPADYGQYSYYGRGPVNNYADRKTGQFIQRYDSTVE
GQYFPWPKPQSTGNREDLRWCALTNSAGSGLLFVAKDQFAASALPWSELEMTLAPHTHQL
PKSSGTHLYLLADVTGLGGNSCGQGPPLEQDRVRASAQRFGFLIRPLQQHNQALQAKVAL
AGNMPIRIVRDQKGEVQVASERGDSRLMVQVGNKPAQPYTTPFVLRDAAEVSAWYADNEK
SKVSLRFPKIETISMQVLSASSQERGEGNAEHLVDGDPSTIWHTMYSVTVAQYPHWVDFD
AGELKLVKGFTYLPRQNGANGRIKGYRLQLSTDGKNWSDTVAEGEFNRDGKLKTIMLAKP
TKARFIRFTALSAQDGQDFASAAEFSVLAD
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgatgactaacaccataacctctgcttgcaagattgtctggttttttatgtttccactg
ctgctgttgggacagagccgacctgcggtggattctattcccggatttgcctatggggag
caggcgcatccttccggaaaggaatgggaatcccccgaagcattatccctcaataaagaa
ttgccgcacgcctatcatttctcttttaagaaggtggagtcggcacgtgccgtgttgccg
gagtattccgaatattggcgctcgttggatggtacgtggaagtttcattgggccaaaaca
cccaccgaacggcctcaggatttttatcggtctgattttaatgccgcagcttgggacgat
gtgcccgtgccaatgagctggaatatccttggtattcaaaaggatggtaccttgaaatat
ggcgtgccaatctatgtgaaccagcctgtaatctttcaacaccaagtgaaggtagacgat
tggcggggtggcgtgatgcgcacacctcctcagcattggacgacctatatagaccggaat
gaggtggggtcctatcgtcgtagcttctcggtgcctgcggattggaaggacaaagaggtt
tacatcaactttgatggagtagactctttcttctatctgtggatcaatggtaaatatgta
gggttttcaaaaaattctagaaacctcgcatcgtttaatatcagcaaatatttgcgggct
aaaggagagaatattgttgcggtggaggtatatcgcaattccgatgcttccttcttggag
gctcaggatatgtttcggcttcccggtatttttcgaactgtatctatctcggccaaacct
aaggtgcagattcgtaatctcgtcgccattcccgatctcgatagcgcatacaaacaggcc
agtttacaggtgacggccgaagtaacaaaccaagctggacaggatgtggcaggttacgct
attcggtatagtttatatgccaataagctttatagcgatgaaggtgtgaaggttgacgcc
atcaatttgcggcgctcgatagggacggttcaaaaaggagctaccgctgttgtcgaccaa
gcccttaaagtagacaatccacagaaatggtctgcagaaaatccgtatcggtatacgttg
attgccgagttgctggatcgaaaaggaaaagtggtcgatgtggtgtccagttatataggc
ttccgtaaggtagaaatcaaagataccccggcgcagcaggatgagtttggtcttgccggc
cgttatttttacgtaaacggaaagccggtaaagctaaaaggtgtaaaccgacacgaaaca
aaccccgaaaagggaaaagttatctcgcgcaagcagatggaagaggaggtgaagctgatg
aaaagggctaacatcaaccatgttcgaaattcgcattaccccgacgatccctattggtat
tacctctgcgacaaatatggtatctacttggaggatgaagcaaatctagaaagccatgaa
tactattatggtgaagcctcactgtcgcacccaccggaatggaaaaatgcacatgtagcg
cgcaacttggagatggtacacgcgacgattaaccatccggccatcgtgatttggtctttg
ggtaacgaggcgggtcctggaaagaactttgtggccgcctacgaagccattaagaaggtg
gatgtctctcgtccggtgcagtacgagcgcaataatagcattgtcgatatgggctcgaac
caatacccgtccatcgactgggtgcgcgaggcggtaaaagggaagtacaggttgaagtat
ccctttcatatttcggagtatgcccattccatgggtaatgccaccggcaacttgattgac
tattgggaagcaatcgaatcgactaatttctttatgggaggagctatttgggactggata
gatcaatcgatgtatgcctatgacaagactacgggtgagcggtatgtggcctatggtggt
gattttggggacaagcctaatgacggtacttttgtgatgaatggattagtgttttctgac
ttgacacccaaaccggcctattttgaagtacgtaaagtttaccagaatgtagccgtacgt
gcggtagatatgcaaatgggaacggtagaaatattcaataaaaactatttcaacagtttg
gacgactatgatgtgctgtggtcgctatggaaagatggtgtcgaaatcgagcgaaaggct
acgtttaagggcgatgtgacaaacatagcggcaagaacggggcgtcaagtttcgataccg
tatgatttttctagtcttgatccccaatcagaatattttgtcaaagtgcagtttctactc
aaagaggatcggccttgggcggcagccggcgaggtgcagatggaggagcagctgctcgtt
aaaactgccgacatgtggccatctatagtaagcgtagcaaagggggaagccatacagatc
aacggcgaagctgggttaaaagtgttaaaagggaaggactttgtggtgaaatttgacgat
gccacgggaagcatctaccagcttgtctatggcggtaatattcttatccgcgatggcgaa
ggaccgcgcttggatgcgctacgtgcaccactggacaatgataactgggcttatcagcaa
tggttcgaaaagggactgcatcagttgaaacaccgggccttgcaagcgaatgcttatccg
cgagcggatggcgcttatgtgctttcctatacggtggaatcacaggccgcacatggagcg
acaattcgcggaggaagctcgggcacctataccttggacgagcaccaagatgtgcctttt
aataaaagcgactttaaatttaccagcaattatatttggaccgtctatccggatggttct
atcgagctgcagagcagcatcacgtcgaacaacagtagcttgatccttccgcatctaggt
tttgctatgcagatacctgccgattatgggcagtacagctactatggtcgtggtccggta
aacaactatgccgacaggaaaacagggcagtttatacaacgctatgatagtacggtcgaa
gggcaatattttccttggcctaagccacagtcgaccggaaatagggaagatttacgctgg
tgtgcattgaccaatagcgctggcagcggtctgctctttgttgcaaaggatcaatttgct
gcttcggctttgccttggagcgagttagagatgactttagcgccccatacgcatcagttg
cctaaaagttccggcacgcacctctaccttttggcggatgtgactggccttggtggtaac
agctgtggacagggaccgccattggaacaggatcgcgtcagggcttctgcacagcgtttc
ggttttttgattcggccattgcagcaacataaccaggccttgcaggccaaagttgcctta
gcggggaatatgcccatccgcatcgtgcgcgaccaaaaaggtgaggtgcaggttgcttcc
gaacggggcgattcccgcttgatggtacaggtaggtaataaacctgcacagccatatact
acgccatttgtgttacgtgatgcggcggaggtatctgcttggtacgccgataacgagaaa
tcgaaagttagtctgcgttttccaaagatagagaccattagcatgcaagtgctttcggca
tccagccaagaaaggggagaaggaaatgcggaacatctcgtggatggtgatccatcgaca
atttggcataccatgtactcggtaaccgtagcacagtatccgcattgggtagattttgat
gcgggtgagcttaagctagtgaagggttttacgtatttgcctcgacaaaacggagcaaac
ggacgcataaaaggctatcgtttgcagcttagcacggatggtaaaaactggagtgacacg
gtggcggaaggagagtttaatcgtgatggtaaattgaaaaccatcatgctggcgaagcct
acaaaagcgcgtttcattcggtttactgccttgagcgcccaagatgggcaagattttgcc
tctgcagcggaattttccgtgttggccgactaa
DBGET
integrated database retrieval system
