Sphingobacterium bambusae: SCB77_09850
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Entry
SCB77_09850 CDS
T09645
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00300
Lysine biosynthesis
sbam00470
D-Amino acid metabolism
sbam01100
Metabolic pathways
sbam01110
Biosynthesis of secondary metabolites
sbam01120
Microbial metabolism in diverse environments
sbam01230
Biosynthesis of amino acids
Module
sbam_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCB77_09850 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCB77_09850 (dapF)
Enzymes [BR:
sbam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SCB77_09850 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
ACT
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WPL50749
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All DBs
Position
2385712..2386494
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AA seq
260 aa
AA seq
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MSEKLFFSKYQGAGNDFILVDNRTGFFDRSNVDLVKSLCDRRFGIGADGLMLLQDIKNFD
FEMVYFNADGREGTMCGNGGRCIVAFARDLGLINDNTAFLAVDGSHEAKIQREQVDLGMI
NVSTTARDGAAYIINTGSPHYIQFVEDLKNLSVYDAGYAIRNNDTYREAGINVNFIEQES
DGGYFVRTFERGVEDETLACGTGATAAAMAVALANGLEGHLEIPIRVLGGQLYISFHRAG
DLFTDVRLKGPAQFVFSGKI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattatttttttcaaaatatcaaggcgcagggaatgatttcattctagtg
gacaacaggacaggttttttcgatcgttccaacgttgatttagttaaaagtctttgcgat
cggcgatttggaatcggcgcagacggtcttatgctacttcaagatataaaaaactttgat
ttcgagatggtgtactttaatgctgatggccgcgaaggaacaatgtgcggaaacggaggt
cgatgtatcgtagcctttgctcgtgaccttggactgattaacgataacactgcctttttg
gcagtagatggcagccatgaagccaaaatacaacgtgaacaagtagatttgggcatgata
aacgtcagcacgaccgcccgcgatggtgctgcatatatcattaacaccggctctcctcat
tatattcaattcgtggaagacctgaaaaatctatccgtatatgatgctggctatgctatc
cgcaataacgacacttatcgtgaagcaggcatcaatgtgaactttatcgaacaagagtcc
gacggcggttactttgtacgcaccttcgaacgtggcgtggaagatgaaacgctagcctgt
ggaacaggagcaactgctgcagccatggccgtcgcgctagcaaacggacttgaagggcat
ttagaaattcccattcgcgtccttggcggacagctttatattagcttccaccgagccgga
gacttgtttaccgatgtgcgcctgaaaggaccagcacagtttgtttttagcggaaaaatc
taa
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