Sphingobacterium bambusae: SCB77_12005
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Entry
SCB77_12005 CDS
T09645
Name
(GenBank) glycoside hydrolase family 88 protein
KO
K15532
unsaturated rhamnogalacturonyl hydrolase [EC:
3.2.1.172
]
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SCB77_12005
Enzymes [BR:
sbam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.172 unsaturated rhamnogalacturonyl hydrolase
SCB77_12005
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_88
DUF4350
Beta-AFase-like_GH127_cat
IFT52_GIFT
Glyco_hydro_76
GlcNAc_2-epim
C5-epim_C
Glyco_hydro_47
Motif
Other DBs
NCBI-ProteinID:
WPL46692
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All DBs
Position
2871651..2873558
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AA seq
635 aa
AA seq
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MKKHIILILCLFLSMPVLKAQKAVSEQMALTAIDKLFKDARFTNPEKGPTWTYDMGVVLE
GVAEVWRNTGDGAYFDYIQKSMDQFISKDGDIRNYKATEYNIDHVKNGRSLLFLYKVTGN
PKYLKASEKLYTQLKSHPRTKEGGFWHKQIYPYQMWLDGLYMAQPFYTEYAALMNIPSIY
DDVVNQFTYMENHARDSKTGLLYHGWDESRQERWADPNTGLSKHFWGRGMGWFAMALVDV
LDNFPQDHPRRGELLAILTRTLTAAAKFQDPKTGVWFDVIDLGTREGNYVEASASSMFVY
AMAKAVRKGYVKASFQKNVDKGYAGLLKEFVTPAGPDRVDLNRVVEVSGLGGKKYRDGSF
EYYMSEPIRSNDPKGVGAFILASSEVEFAKKPQPKKKVLVTLDNFYNKEFKKGPSGQMEP
YHYLWNGDDNNGFSLLGRIFEQHGAALHTLPDAPTSQNLAKSKIYVIVDPDTEKETEKPN
FMTEAQAKEIAKWVHKGGVLVLFLNDAGNCEISKFNILPQQFGITFNEDSRNRVQGDQFE
MGAIQIPAGTGIFDRTKKIYIKEISTMQVKDPAKATVQDKGDNIIVTAKYGKGTVFAIGD
PWLYNEYTDGRKLPAEFQNFDAANELVSWLIKQTK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcatatcatccttatactttgtttgttcttgtctatgccggtgctgaaggcc
caaaaggcggtttccgagcagatggcactgacggccatcgacaagttatttaaagatgca
cggttcaccaatcccgagaagggacctacttggacctacgacatgggcgtggtgctagaa
ggtgtggccgaagtgtggcgcaacaccggcgatggcgcctattttgattacatccaaaaa
tcgatggatcagtttatatccaaagatggggatatccgcaattataaagccacagaatac
aatatcgatcatgtaaagaacggtcgttctctattattcctgtataaggtaaccggaaat
cccaaatacctaaaagccagcgagaagctgtacacccaattgaagtcgcatccccgcact
aaggaagggggcttttggcataagcagatttatccttaccaaatgtggctggatggattg
tatatggcacaacccttctataccgaatatgcggccttgatgaacataccgagcatttat
gatgatgtggtcaaccagtttacctatatggaaaaccatgcgcgcgatagcaagaccggc
ctcttgtaccatggttgggatgaatcacgccaagagcgctgggcagatcccaatacgggg
ctttccaagcatttctggggtcgcggaatgggctggtttgccatggctcttgttgatgtg
ctcgacaattttccgcaagaccaccctcggcgcggcgagttgctcgccatcttgacgcgc
accttaaccgctgcagccaagtttcaagatcctaaaacaggcgtatggtttgatgtgatc
gacctcggtacacgcgaaggcaactatgtggaggcttcggcttccagcatgtttgtttat
gcgatggccaaagccgttcgtaaaggatatgttaaagcctctttccaaaaaaatgtggac
aagggctatgcaggcctgctgaaggagtttgtgacgccggccgggccagaccgcgtagat
cttaaccgcgtcgtggaggtatcgggcttgggcggcaaaaaatatcgcgatggtagcttt
gaatattacatgagcgagcctatccgcagcaacgaccccaaaggtgtgggcgcctttatc
ttggcttcctccgaagtggaatttgccaagaagccccagccgaagaagaaggtactcgtt
accctcgataatttctacaacaaagaatttaagaaaggccctagcgggcagatggagcct
taccactacctatggaatggcgatgataacaatggcttctccctcttggggcgtattttt
gagcagcacggtgctgccttgcataccctgccggatgctccgacaagccaaaacttagcg
aagagcaagatctacgtgatcgtggatcccgatacggagaaggaaaccgagaagccgaac
tttatgaccgaggcccaagccaaggagattgccaagtgggtgcataaagggggcgtgttg
gtgctcttcttaaacgatgccggcaactgcgagatcagcaagttcaatatcctgccgcag
cagtttggcattaccttcaatgaagatagccgcaaccgcgtgcagggcgatcagttcgag
atgggcgctatacagataccggccggaacgggcattttcgatcgcacgaaaaagatatat
atcaaagagatatccaccatgcaggtgaaagatcctgccaaagcaaccgtgcaggataag
ggcgataatattatcgtgacagccaagtatggcaaaggcacggtattcgctatcggcgac
ccttggctatacaatgaatatacggatggacgtaagctgccagccgagtttcaaaacttt
gatgcagccaacgaattggtgagctggttgataaaacagacaaaataa
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