Sphingobacterium bambusae: SCB77_12370
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Entry
SCB77_12370 CDS
T09645
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbam02000
]
SCB77_12370
Transporters [BR:
sbam02000
]
Other transporters
Pores ion channels [TC:
1
]
SCB77_12370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Surfac_D-trimer
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
WPL51113
LinkDB
All DBs
Position
complement(2952169..2953560)
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AA seq
463 aa
AA seq
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MNYSTIKKTAVAASLVAALGFAESAQAQTPTVFGGRSQYRTWSIGIQGGITTPNVLVGGS
NNFGQKVGYFQNKVGEYYGLTVRKQFSHLFGLELEGNRGRIKTFNSDLVTTPENSLGARS
AETDVNWAASLNGVFQLGTIDFLRRENAVNFYAKVGLGVFANNPVQYANNDFTGNEVYNV
QSNPEGQRWGSEIFGDRENTGDRDYKLAAYVPVGVGVKFKLSEVVALNLGYTMNFTDDNL
LYGPGRSDVKGKFSNVYGGLEFTLGSRDKENLTFANPVATLYDELKDPSLRNEVEALKQR
VSTLEGTVDQLSKDSDGDGVSDKFDKCPGTPAGTAVDGSGCPIKFPEPVVKEATAGAYFA
PIQFEFDSSVLKTESYATLDKLAQELRSANSSVTLDGYASAEGSEDYNMNLSKDRANAVK
QYLVNAGVSASSISANGYGEANPVASNSTEEGRVQNRRVEIKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaactattctacaattaaaaaaacagctgttgcagcttctttagtcgccgctttaggt
tttgctgagagcgctcaagcacaaactccaactgtatttggtggaagatcacaatacaga
acttggtcgatcggtattcaaggcggtatcaccactccaaacgtattggtaggtggatcc
aacaacttcggtcaaaaagttggttacttccaaaacaaagttggtgagtactatggttta
actgtacgcaaacaattctctcacctattcggtttggaattggaaggtaaccgtggtcgt
atcaaaactttcaacagcgatctagtaacaactccagaaaactctttgggtgcaagatca
gcagaaactgatgtaaactgggcagctagcttaaatggtgttttccaattaggtactatc
gacttcctaagaagagaaaatgcagttaacttctacgctaaagtaggtttgggtgtattc
gcgaacaaccctgttcaatatgcaaacaacgatttcacaggtaacgaagtttacaacgta
caaagcaacccagagggacaaagatggggatctgaaatctttggagacagagaaaatact
ggtgaccgcgattacaaattagcagcttacgtaccagtaggtgtaggtgtgaaattcaaa
ttatctgaagttgttgccttgaacttaggttacacgatgaacttcacagacgacaacttg
ttgtacggtccaggtcgttcagatgttaaaggtaaattctctaatgtttacggtggtcta
gagttcactttaggttcacgtgacaaagaaaacttaacttttgctaaccctgttgcaaca
ttatacgatgagttgaaagatccttcattgcgtaacgaagttgaagctttgaaacaacgc
gtatctactttagaaggtactgttgatcaattgagcaaagattctgatggtgacggtgta
tctgataaatttgacaaatgtccaggaacacctgcaggtactgcagtagatggttcagga
tgtcctatcaaattcccagagcctgtagttaaagaagctactgctggtgcttacttcgct
cctattcaattcgaattcgatagctctgtattgaaaactgaatcttacgctactttggat
aaattagctcaagaattacgttcagctaactcatcagttactttagatggttatgcttct
gcagaaggttctgaagactacaacatgaacttgtctaaagaccgtgcaaacgctgttaaa
caatacttggttaacgctggcgtttctgcatcaagcatctctgctaacggatatggcgaa
gctaatccagttgcatctaactcaactgaagaaggccgcgtacaaaaccgtcgtgtagaa
atcaaaaaataa
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