Sphingobacterium bambusae: SCB77_12810
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Entry
SCB77_12810 CDS
T09645
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam03030
DNA replication
sbam03430
Mismatch repair
sbam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCB77_12810
03430 Mismatch repair
SCB77_12810
03440 Homologous recombination
SCB77_12810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbam03032
]
SCB77_12810
03400 DNA repair and recombination proteins [BR:
sbam03400
]
SCB77_12810
Enzymes [BR:
sbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCB77_12810
DNA replication proteins [BR:
sbam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCB77_12810
DNA repair and recombination proteins [BR:
sbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCB77_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WPL46841
LinkDB
All DBs
Position
3062044..3062592
Genome browser
AA seq
182 aa
AA seq
DB search
MTFTAIDFELATAVYTSVCAVGIVKVVDGEIVEQFHSLVRPPDNKYMWQTTRVHGIKPRD
TASAPTFLELFPHIENYLQNAYMVAHNEKFDREVLMKTMAYYGLDYKALGLAPTWDCTSV
IYRAKGFKKTKLSICCRIMGIALNHHDPLSDAKASAQLFLLQDTVTSELIAEHFPDDEQQ
AS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacctttacagcgatagattttgaactggcaacagccgtttatacgagtgtgtgtgcg
gtgggtatcgtaaaggtggtagatggcgagattgtggagcaatttcatagcttggtgcgt
ccacccgataacaagtacatgtggcaaacaacccgtgtgcatggcattaagccgagagat
actgcttcagcacccacatttttagaactttttccgcatattgagaattaccttcagaat
gcttatatggtggcacacaacgagaagtttgatcgggaggtgttgatgaaaaccatggcc
tattacggcttggactataaagcgctagggctagctccaacttgggattgcacgagtgtc
atttatcgtgcaaagggctttaaaaagaccaagttgagcatctgctgtcgcattatgggg
atagcgcttaaccatcacgatccactatcggatgctaaagcgagtgcacaattgtttctt
ttgcaggataccgtgaccagcgaacttattgccgagcattttccggacgacgagcaacag
gcgagttaa
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